ID 804245 - BioProject

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Accession: PRJNA804245 ID: 804245

Kelly Lab bacterial genomes

Whole-genome sequencing data from bacterial isolates cultured from samples processed in the Kelly Laboratory at Duke University.

Accession	PRJNA804245
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Nasopharyngeal Microbiome and Risk of Bacterial Pathogen Colonization in Infants" (Grant ID K23 AI135090, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 7-Feb-2022 Duke University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	117
WGS master	113
Genomic DNA	4
SRA Experiments	113
Protein Sequences	7278
Other datasets
BioSample	117
Assembly	117

Assembly details:

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Assembly level

Number of Assemblies

4
105
8
117

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_030229805.1	JASPGI000000000		SAMN35346776	MSK273	Corynebacterium accolens
GCA_030229685.1	JASPHZ000000000		SAMN35346733	MSK109	Corynebacterium accolens
GCA_030229625.1	JASPID000000000		SAMN35346729	MSK099	Corynebacterium accolens
GCA_030229605.1	JASPHS000000000		SAMN35346740	MSK125	Corynebacterium accolens
GCA_030229285.1	JASPGJ000000000		SAMN35346775	MSK270	Corynebacterium accolens
GCA_030229065.1	JASPHI000000000		SAMN35346750	MSK161	Corynebacterium accolens
GCA_030229025.1	JASPHW000000000		SAMN35346736	MSK121	Corynebacterium accolens
GCA_030228965.1	JASPIK000000000		SAMN35346722	MSK091	Corynebacterium accolens
GCA_030228895.1	JASPIV000000000		SAMN35346711	MSK076	Corynebacterium accolens
GCA_030228865.1	JASPIS000000000		SAMN35346714	MSK079	Corynebacterium accolens
GCA_030232755.1	JASPIG000000000		SAMN35346726	MSK096	Corynebacterium accolens
GCA_030232145.1	JASPJB000000000		SAMN35346705	MSK070	Corynebacterium accolens
GCA_030227185.1	JASPIU000000000		SAMN35346712	MSK077	Corynebacterium accolens
GCA_030227275.1	JASPIW000000000		SAMN35346710	MSK075	Corynebacterium accolens
GCA_030232325.1	JASPJM000000000		SAMN35346694	MSK038	Corynebacterium amycolatum
GCA_030229545.1	JASPIH000000000		SAMN35346725	MSK095	Corynebacterium appendicis
GCA_030229245.1	JASPHA000000000		SAMN35346758	MSK180	Corynebacterium bovis
GCA_030229555.1	JASPIM000000000		SAMN35346720	MSK088	Corynebacterium coyleae
GCA_030229585.1	JASPIE000000000		SAMN35346728	MSK098	Corynebacterium coyleae
GCA_030229005.1	JASPIC000000000		SAMN35346730	MSK104	Corynebacterium coyleae
GCA_030232305.1	JASPJQ000000000		SAMN35346690	MSK033	Corynebacterium coyleae
GCA_030232525.1	JASPJO000000000		SAMN35346692	MSK036	Corynebacterium coyleae
GCA_030232395.1	JASPJS000000000		SAMN35346688	MSK028	Corynebacterium coyleae
GCA_030232865.1	JASPHC000000000		SAMN35346756	MSK173	Corynebacterium freneyi
GCA_030229765.1	JASPGY000000000		SAMN35346760	MSK185	Corynebacterium kefirresidentii
GCA_030229315.1	JASPHH000000000		SAMN35346751	MSK163	Corynebacterium kefirresidentii
GCA_030228925.1	JASPGU000000000		SAMN35346764	MSK194	Corynebacterium kefirresidentii
GCA_030232125.1	JASPJA000000000		SAMN35346706	MSK071	Corynebacterium kefirresidentii
GCA_030250705.1	JASSVP000000000		SAMN35346678	MSK003	Corynebacterium lehmanniae
GCA_030232365.1	JASPJY000000000		SAMN35346682	MSK007	Corynebacterium macclintockiae
GCA_030232505.1	JASPJW000000000		SAMN35346684	MSK010	Corynebacterium macclintockiae
GCA_030232705.1	JASPIF000000000		SAMN35346727	MSK097	Corynebacterium marquesiae
GCA_030228985.1	JASPHO000000000		SAMN35346744	MSK144	Corynebacterium marquesiae
GCA_030229635.1	JASPII000000000		SAMN35346724	MSK093	Corynebacterium marquesiae
GCA_030228815.1	JASPGH000000000		SAMN35346777	MSK281	Corynebacterium marquesiae
GCA_030229865.1	JASPGO000000000		SAMN35346770	MSK217	Corynebacterium marquesiae
GCA_030227305.1	JASPFW000000000		SAMN35346788	MSK315	Corynebacterium marquesiae
GCA_030227265.1	JASPIN000000000		SAMN35346719	MSK087	Corynebacterium marquesiae
GCA_030227215.1	JASPIQ000000000		SAMN35346716	MSK081	Corynebacterium mastitidis
GCA_030229925.1	JASPGF000000000		SAMN35346779	MSK290	Corynebacterium propinquum
GCA_030228935.1	JASPHT000000000		SAMN35346739	MSK124	Corynebacterium propinquum
GCA_030229105.1	JASPHN000000000		SAMN35346745	MSK146	Corynebacterium propinquum
GCA_030229035.1	JASPGB000000000		SAMN35346783	MSK305	Corynebacterium pseudodiphtheriticum
GCA_030229195.1	JASPHD000000000		SAMN35346755	MSK172	Corynebacterium pseudodiphtheriticum
GCA_030229185.1	JASPGK000000000		SAMN35346774	MSK238	Corynebacterium pseudodiphtheriticum
GCA_030229165.1	JASPGL000000000		SAMN35346773	MSK223	Corynebacterium pseudodiphtheriticum
GCA_030229145.1	JASPGC000000000		SAMN35346782	MSK300	Corynebacterium pseudodiphtheriticum
GCA_030228805.1	JASPGG000000000		SAMN35346778	MSK283	Corynebacterium pseudodiphtheriticum
GCA_030229835.1	JASPGS000000000		SAMN35346766	MSK198	Corynebacterium pseudodiphtheriticum
GCA_030229785.1	JASPGR000000000		SAMN35346767	MSK202	Corynebacterium pseudodiphtheriticum
GCA_030229665.1	JASPHY000000000		SAMN35346734	MSK110	Corynebacterium pseudodiphtheriticum
GCA_030229305.1	JASPIJ000000000		SAMN35346723	MSK092	Corynebacterium pseudodiphtheriticum
GCA_030229515.1	JASPGZ000000000		SAMN35346759	MSK184	Corynebacterium pseudodiphtheriticum
GCA_030229485.1	JASPHP000000000		SAMN35346743	MSK141	Corynebacterium pseudodiphtheriticum
GCA_030229425.1	JASPGX000000000		SAMN35346761	MSK188	Corynebacterium pseudodiphtheriticum
GCA_030229415.1	JASPHE000000000		SAMN35346754	MSK168	Corynebacterium pseudodiphtheriticum
GCA_030232685.1	JASPHG000000000		SAMN35346752	MSK164	Corynebacterium pseudodiphtheriticum
GCA_030232605.1	JASPFX000000000		SAMN35346787	MSK314	Corynebacterium pseudodiphtheriticum
GCA_030232565.1	JASPJN000000000		SAMN35346693	MSK037	Corynebacterium pseudodiphtheriticum
GCA_030232845.1	JASPHF000000000		SAMN35346753	MSK166	Corynebacterium pseudodiphtheriticum
GCA_030232785.1	JASPHX000000000		SAMN35346735	MSK118	Corynebacterium pseudodiphtheriticum
GCA_030232045.1	JASPFY000000000		SAMN35346786	MSK311	Corynebacterium pseudodiphtheriticum
GCA_030227325.1	JASPIR000000000		SAMN35346715	MSK080	Corynebacterium pseudodiphtheriticum
GCA_030227205.1	JASPHR000000000		SAMN35346741	MSK127	Corynebacterium pseudodiphtheriticum
GCA_030232515.1	JASPKB000000000		SAMN35346679	MSK004	Corynebacterium sp. MSK004
GCA_030232385.1	JASPJZ000000000		SAMN35346681	MSK006	Corynebacterium sp. MSK006
GCA_030232585.1	JASPJX000000000		SAMN35346683	MSK008	Corynebacterium sp. MSK008
GCA_030232435.1	JASPJU000000000		SAMN35346686	MSK012	Corynebacterium sp. MSK012
GCA_030232425.1	JASPJT000000000		SAMN35346687	MSK019	Corynebacterium sp. MSK019
GCA_030232065.1	JASPJR000000000		SAMN35346689	MSK032	Corynebacterium sp. MSK032
GCA_030232615.1	JASPJP000000000		SAMN35346691	MSK035	Corynebacterium sp. MSK035
GCA_030232315.1	JASPJL000000000		SAMN35346695	MSK039	Corynebacterium sp. MSK039
GCA_030232265.1	JASPJK000000000		SAMN35346696	MSK041	Corynebacterium sp. MSK041
GCA_030232825.1	JASPJJ000000000		SAMN35346697	MSK044	Corynebacterium sp. MSK044
GCA_030232285.1	JASPJI000000000		SAMN35346698	MSK047	Corynebacterium sp. MSK047
GCA_030232185.1	JASPIZ000000000		SAMN35346707	MSK072	Corynebacterium sp. MSK072
GCA_030232085.1	JASPIY000000000		SAMN35346708	MSK073	Corynebacterium sp. MSK073
GCA_030229735.1	JASPIX000000000		SAMN35346709	MSK074	Corynebacterium sp. MSK074
GCA_030227155.1	JASPIT000000000		SAMN35346713	MSK078	Corynebacterium sp. MSK078
GCA_030229705.1	JASPIP000000000		SAMN35346717	MSK082	Corynebacterium sp. MSK082
GCA_030227345.1	JASPIO000000000		SAMN35346718	MSK084	Corynebacterium sp. MSK084
GCA_030229725.1	JASPIL000000000		SAMN35346721	MSK090	Corynebacterium sp. MSK090
GCA_030229405.1	JASPIB000000000		SAMN35346731	MSK105	Corynebacterium sp. MSK105
GCA_030229505.1	JASPIA000000000		SAMN35346732	MSK107	Corynebacterium sp. MSK107
GCA_030229435.1	JASPHV000000000		SAMN35346737	MSK122	Corynebacterium sp. MSK122
GCA_030229365.1	JASPHU000000000		SAMN35346738	MSK123	Corynebacterium sp. MSK123
GCA_030227225.1	JASPHQ000000000		SAMN35346742	MSK130	Corynebacterium sp. MSK130
GCA_030229215.1	JASPHM000000000		SAMN35346746	MSK150	Corynebacterium sp. MSK150
GCA_030232645.1	JASPHL000000000		SAMN35346747	MSK151	Corynebacterium sp. MSK151
GCA_030232715.1	JASPHK000000000		SAMN35346748	MSK156	Corynebacterium sp. MSK156
GCA_030229085.1	JASPHJ000000000		SAMN35346749	MSK158	Corynebacterium sp. MSK158
GCA_030229125.1	JASPHB000000000		SAMN35346757	MSK175	Corynebacterium sp. MSK175
GCA_030229385.1	JASPGW000000000		SAMN35346762	MSK189	Corynebacterium sp. MSK189
GCA_030229905.1	JASPGV000000000		SAMN35346763	MSK192	Corynebacterium sp. MSK192
GCA_030228885.1	JASPGT000000000		SAMN35346765	MSK195	Corynebacterium sp. MSK195
GCA_030229885.1	JASPGQ000000000		SAMN35346768	MSK204	Corynebacterium sp. MSK204
GCA_030232655.1	JASPGN000000000		SAMN35346771	MSK218	Corynebacterium sp. MSK218
GCA_030229825.1	JASPGM000000000		SAMN35346772	MSK222	Corynebacterium sp. MSK222
GCA_030232745.1	JASPGE000000000		SAMN35346780	MSK293	Corynebacterium sp. MSK293
GCA_030232885.1	JASPGD000000000		SAMN35346781	MSK297	Corynebacterium sp. MSK297
GCA_030229265.1	JASPGA000000000		SAMN35346784	MSK306	Corynebacterium sp. MSK306
GCA_030227355.1	JASPFZ000000000		SAMN35346785	MSK310	Corynebacterium sp. MSK310
GCA_030232805.1	JASPJC000000000		SAMN35346704	MSK067	Corynebacterium striatum
GCA_030232485.1	JASPKA000000000		SAMN35346680	MSK005	Corynebacterium striatum
GCA_030232105.1	JASPJD000000000		SAMN35346703	MSK065	Corynebacterium striatum
GCA_030231045.1	JASPKC000000000		SAMN35346677	MSK002	Corynebacterium striatum
GCA_030232205.1	JASPJE000000000		SAMN35346702	MSK064	Corynebacterium striatum
GCA_030232165.1	JASPJF000000000		SAMN35346701	MSK060	Corynebacterium striatum
GCA_030232245.1	JASPJH000000000		SAMN35346699	MSK050	Corynebacterium striatum
GCA_030232215.1	JASPJG000000000		SAMN35346700	MSK059	Corynebacterium striatum
GCA_030229345.1	JASPGP000000000		SAMN35346769	MSK207	Corynebacterium tuberculostearicum
GCA_030232465.1	JASPJV000000000		SAMN35346685	MSK011	Corynebacterium ulcerans
GCA_022288805.2	JAKOPM000000000		SAMN25718863	MSK136	Corynebacterium yonathiae
GCA_039830105.1		1	SAMN39078566	MSK211	Dolosigranulum savutiense
GCA_039830095.1		1	SAMN39078567	MSK294	Dolosigranulum savutiense
GCA_039830085.1		1	SAMN39078568	MSK312	Dolosigranulum savutiense
GCA_039830075.1		1	SAMN39078569	MSK433	Dolosigranulum savutiense

SRA Data Details

Parameter	Value
Data volume, Gbases	692
Data volume, Tbytes	0.24

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