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Accession: PRJNA809001 ID: 809001

Solanum

Solanum Genome sequencing and assembly

The Super-pangenome Reveals the Panorama of Evolution and Structural Variation across Tomato Species

Accession	PRJNA809001
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Solanum[Taxonomy ID: 4107] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Submission	Registration date: 11-Jan-2023 Cornell University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	11
Other datasets
BioSample	11
Assembly	11

Assembly details:

Assembly level

Number of Assemblies

Scaffold

11
11

Assembly	Level	WGS	BioSample	Cultivar	Taxonomy
GCA_027704845.1		JAKWIW000000000	SAMN26137346	ZY63	Solanum chilense
GCA_027704785.1		JAKWIX000000000	SAMN26137347	ZY60	Solanum chmielewskii
GCA_027704805.1		JAKWIY000000000	SAMN26137362	ZY62	Solanum corneliomulleri
GCA_027704825.1		JAKWIZ000000000	SAMN26137363	ZY56	Solanum galapagense
GCA_027704765.1		JAKWJA000000000	SAMN26137364	ZY59	Solanum habrochaites
GCA_027705045.1		JAKWJB000000000	SAMN26137365	ZY64	Solanum lycopersicoides
GCA_027705125.1		JALGYU000000000	SAMN26852762	ZY65	Solanum lycopersicum var. cerasiforme
GCA_027704885.1		JALGYV000000000	SAMN26852763	M82	Solanum lycopersicum
GCA_027704865.1		JAKWJC000000000	SAMN26137366	ZY58	Solanum neorickii
GCA_027705065.1		JAKWJD000000000	SAMN26137367	ZY61	Solanum peruvianum
GCA_027705105.1		JALGYT000000000	SAMN26852761	ZY57	Solanum pimpinellifolium

Supplemental Content

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Solanum
Solanum
Solanum Genome sequencing and assembly

BioProject
Mus musculus strain C57BL6/J chromosome 6 clone RP23-75J13, complete sequence
Mus musculus strain C57BL6/J chromosome 6 clone RP23-75J13, complete sequence
gi|51510948|gnl|nisc|RP23-75J13|gb| 469.5|

Nucleotide
MIR4658 microRNA 4658 [Homo sapiens]
MIR4658 microRNA 4658 [Homo sapiens]
Gene ID:100616439

Gene
LOC129998901 [Homo sapiens]
LOC129998901 [Homo sapiens]
Gene ID:129998901

Gene

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