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Accession: PRJNA819090 ID: 819090

Severe acute respiratory syndrome coronavirus 2

Severe acute respiratory syndrome coronavirus 2 Genome sequencing

See Genome Information for Severe acute respiratory syndrome-related coronavirus
SARS-CoV-2 sequencing of wastewater from San Diego County
AccessionPRJNA819090
Data TypeGenome sequencing
ScopeMultiisolate
OrganismSevere acute respiratory syndrome coronavirus 2[Taxonomy ID: 2697049]
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; Severe acute respiratory syndrome coronavirus 2
PublicationsKarthikeyan S et al., "Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission.", Nature, 2022 Sep;609(7925):101-108
SubmissionRegistration date: 23-Mar-2022
San Diego Epidemiology and Research for COVID Health (SEARCH)
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1489
Publications
PubMed1
PMC1
Other datasets
BioSample1493
SRA Data Details
ParameterValue
Data volume, Gbases338
Data volume, Tbytes0.15

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