ID 833080 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA833080 ID: 833080

Various isolates of Bacteroides, Streptococcus, Clostridium, Klebsiella, Enterococcus, and E. coli. Genome sequencing and assembly

WGS sequencing of various bacterial isolates which were collected from mouse stool and clinical human colon samples.

Accession	PRJNA833080
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Genomics and Bioinformatics Core" (Grant ID P20 GM103506, National Institute of General Medical Sciences)
Submission	Registration date: 28-Apr-2022 University of New Hampshire
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	101
SRA Experiments	63
Other datasets
BioSample	138
Assembly	101

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

101
101

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_030546185.1	JAUONL000000000	SAMN36496269	GP0119	Bacteroides caccae
GCA_030546165.1	JAUONK000000000	SAMN36496270	GP0120	Bacteroides caccae
GCA_030546125.1	JAUONJ000000000	SAMN36496271	GP0122	Bacteroides caccae
GCA_023958435.1	JAMXHY000000000	SAMN29024624	P1-H9	Bacteroides fragilis
GCA_023894135.1	JAMWYN000000000	SAMN29024623	P1-H7	Bacteroides fragilis
GCA_024295145.1	JANCLR000000000	SAMN29024620	P1-G4	Bacteroides fragilis
GCA_024294945.1	JANCNQ000000000	SAMN29024622	P1-G6	Bacteroides fragilis
GCA_024295045.1	JANCNO000000000	SAMN29024619	P1-G3	Bacteroides fragilis
GCA_024296585.1	JANCNB000000000	SAMN29024636	P2-H5	Bacteroides fragilis
GCA_024357725.1	JANEWD000000000	SAMN29024611	P1-A6	Bacteroides fragilis
GCA_024128795.1	JAMYHA000000000	SAMN29024621	P1-G5	Bacteroides fragilis
GCA_024007805.1	JAMXKL000000000	SAMN29024635	P2-H2	Bacteroides fragilis
GCA_024261365.1	JANCLQ000000000	SAMN29024614	P1-C5	Bacteroides fragilis
GCA_023276265.1	JALXKG000000000	SAMN27958585	P2-E3	Bacteroides fragilis
GCA_023275035.1	JALXJW000000000	SAMN27958574	P1-D1	Bacteroides fragilis
GCA_023276335.1	JALXKA000000000	SAMN27958581	P1-D3	Bacteroides fragilis
GCA_023276305.1	JALXKI000000000	SAMN27958569	P2-E4	Bacteroides fragilis
GCA_023274715.1	JALXKF000000000	SAMN27958578	P1-A3	Bacteroides fragilis
GCA_023274895.1	JALXKE000000000	SAMN27958579	P1-A4	Bacteroides fragilis
GCA_023274775.1	JALXKC000000000	SAMN27958584	P2-E2	Bacteroides fragilis
GCA_023274755.1	JALXKD000000000	SAMN27958572	P3-A9	Bacteroides fragilis
GCA_023274495.1	JALXKJ000000000	SAMN27958571	P2-H4	Bacteroides fragilis
GCA_023274245.1	JALXJX000000000	SAMN27958583	P1-G2	Bacteroides fragilis
GCA_023274315.1	JALXJZ000000000	SAMN27958570	P2-H3	Bacteroides fragilis
GCA_030545565.1	JAUOMG000000000	SAMN36496301	GP0982	Bacteroides thetaiotaomicron
GCA_030545525.1	JAUOMF000000000	SAMN36496302	GP0984	Bacteroides thetaiotaomicron
GCA_030545535.1	JAUOME000000000	SAMN36496304	GP0992	Bacteroides thetaiotaomicron
GCA_030545425.1	JAUOLZ000000000	SAMN36496311	GP1028	Bacteroides thetaiotaomicron
GCA_030545385.1	JAUOLY000000000	SAMN36496312	GP1029	Bacteroides thetaiotaomicron
GCA_030546235.1	JAUONM000000000	SAMN36496267	GP0074	Clostridium perfringens
GCA_030545585.1	JAUOMH000000000	SAMN36496300	GP0946	Clostridium perfringens
GCA_024294865.1	JANCNF000000000	SAMN29024632	P2-F8	Clostridium perfringens
GCA_024295025.1	JANCNR000000000	SAMN29024612	P1-B8	Clostridium perfringens
GCA_024128825.1	JAMYGY000000000	SAMN29024629	P2-F12	Clostridium perfringens
GCA_024055875.1	JAMXLS000000000	SAMN29024627	P2-E7	Clostridium perfringens
GCA_030545665.1	JAUOMM000000000	SAMN36496295	GP0410	Enterococcus faecalis
GCA_030545925.1	JAUOMY000000000	SAMN36496282	GP0308	Enterococcus faecalis
GCA_030545965.1	JAUONA000000000	SAMN36496280	GP0305	Enterococcus faecalis
GCA_030545785.1	JAUOMR000000000	SAMN36496290	GP0381	Enterococcus faecalis
GCA_030545765.1	JAUOMQ000000000	SAMN36496291	GP0382	Enterococcus faecalis
GCA_030545725.1	JAUOML000000000	SAMN36496296	GP0412	Enterococcus faecalis
GCA_030545635.1	JAUOMK000000000	SAMN36496297	GP0450	Enterococcus faecalis
GCA_030546095.1	JAUONG000000000	SAMN36496274	GP0237	Enterococcus faecalis
GCA_030546065.1	JAUONF000000000	SAMN36496275	GP0238	Enterococcus faecalis
GCA_024137045.1	JAMYJS000000000	SAMN29024580	N2-A1	Enterococcus faecalis
GCA_024294835.1	JANCNH000000000	SAMN29024595	N2-D7	Enterococcus faecalis
GCA_024294825.1	JANCNI000000000	SAMN29024578	A-C3	Enterococcus faecalis
GCA_024294885.1	JANCNC000000000	SAMN29024585	N2-B3	Enterococcus faecalis
GCA_024295105.1	JANCNL000000000	SAMN29024583	N2-A4	Enterococcus faecalis
GCA_024295085.1	JANCMZ000000000	SAMN29024581	N2-A2	Enterococcus faecalis
GCA_024357945.1	JANEZR000000000	SAMN29024582	N2-A3	Enterococcus faecalis
GCA_030545975.1	JAUONC000000000	SAMN36496278	GP0282	Enterococcus gallinarum
GCA_030545735.1	JAUOMO000000000	SAMN36496293	GP0400	Escherichia coli
GCA_030545695.1	JAUOMP000000000	SAMN36496292	GP0395	Escherichia coli
GCA_030545685.1	JAUOMN000000000	SAMN36496294	GP0409	Escherichia coli
GCA_030545945.1	JAUOMZ000000000	SAMN36496281	GP0306	Escherichia coli
GCA_030545845.1	JAUOMU000000000	SAMN36496286	GP0351	Escherichia coli
GCA_030545825.1	JAUOMT000000000	SAMN36496287	GP0365	Escherichia coli
GCA_030545795.1	JAUOMS000000000	SAMN36496288	GP0377	Escherichia coli
GCA_030545895.1	JAUOMX000000000	SAMN36496283	GP0319	Escherichia coli
GCA_030545885.1	JAUOMW000000000	SAMN36496284	GP0320	Escherichia coli
GCA_030545865.1	JAUOMV000000000	SAMN36496285	GP0322	Escherichia coli
GCA_030546025.1	JAUOND000000000	SAMN36496277	GP0281	Escherichia coli
GCA_030546045.1	JAUONE000000000	SAMN36496276	GP0247	Escherichia coli
GCA_030545985.1	JAUONB000000000	SAMN36496279	GP0284	Escherichia coli
GCA_030546085.1	JAUONH000000000	SAMN36496273	GP0236	Escherichia coli
GCA_030546135.1	JAUONI000000000	SAMN36496272	GP0234	Escherichia coli
GCA_030541635.1	JAUNZJ000000000	SAMN36496289	GP0378	Escherichia coli
GCA_023274035.1	JALXJY000000000	SAMN27958573	P1-C8	Escherichia coli
GCA_023274505.1	JALXKB000000000	SAMN27958575	P1-F10	Escherichia coli
GCA_023274915.1	JALXKH000000000	SAMN27958577	N2-A5	Escherichia coli
GCA_024128775.1	JAMYGZ000000000	SAMN29024591	N2-C7	Escherichia coli
GCA_024296545.1	JANCNJ000000000	SAMN29024597	N2-E5	Escherichia coli
GCA_024295005.1	JANCNP000000000	SAMN29024586	N2-B6	Escherichia coli
GCA_024137095.1	JAMYHZ000000000	SAMN29024641	P3-B7	Klebsiella pneumoniae
GCA_024128745.1	JAMYGX000000000	SAMN29024639	P3-B12	Klebsiella pneumoniae
GCA_024294985.1	JANCNN000000000	SAMN29024638	P3-B11	Klebsiella pneumoniae
GCA_024295065.1	JANCMY000000000	SAMN29024634	P2-H12	Klebsiella pneumoniae
GCA_024295185.1	JANCMX000000000	SAMN29024642	P3-B8	Klebsiella pneumoniae
GCA_024295165.1	JANCNA000000000	SAMN29024643	P3-B9	Klebsiella pneumoniae
GCA_024296595.1	JANCNK000000000	SAMN29024637	P3-B10	Klebsiella pneumoniae
GCA_024296465.1	JANCNG000000000	SAMN29024613	P1-C12	Klebsiella pneumoniae
GCA_030546315.1	JAUONS000000000	SAMN36496260	GP0003	Lactobacillus paragasseri
GCA_030545485.1	JAUOMD000000000	SAMN36496305	GP1004	Lactococcus lactis
GCA_030541705.1	JAUNZL000000000	SAMN36496264	GP0046	Ligilactobacillus animalis
GCA_031119655.1	JAVHZY000000000	SAMN36405173	GP0067	Phocaeicola sp. GP0067
GCA_030546205.1	JAUONN000000000	SAMN36496266	GP0068	Phocaeicola vulgatus
GCA_030545495.1	JAUOMC000000000	SAMN36496307	GP1008	Phocaeicola vulgatus
GCA_030545445.1	JAUOMB000000000	SAMN36496309	GP1018	Phocaeicola vulgatus
GCA_030545435.1	JAUOMA000000000	SAMN36496310	GP1019	Phocaeicola vulgatus
GCA_030541685.1	JAUNZK000000000	SAMN36496268	GP0081	Phocaeicola vulgatus
GCA_030545605.1	JAUOMI000000000	SAMN36496299	GP0477	Streptococcus infantis
GCA_030546245.1	JAUONP000000000	SAMN36496263	GP0025	Streptococcus oralis
GCA_030546225.1	JAUONO000000000	SAMN36496265	GP0053	Streptococcus oralis
GCA_030546285.1	JAUONQ000000000	SAMN36496262	GP0012	Streptococcus oralis
GCA_024295125.1	JANCNM000000000	SAMN29024631	P2-F3	Streptococcus oralis
GCA_030545615.1	JAUOMJ000000000	SAMN36496298	GP0470	Streptococcus parasanguinis
GCA_030546305.1	JAUONR000000000	SAMN36496261	GP0011	Streptococcus sp. GP0011
GCA_030541645.1	JAUNZI000000000	SAMN36496303	GP0989	Thomasclavelia ramosa
GCA_030541625.1	JAUNZH000000000	SAMN36496306	GP1005	Thomasclavelia ramosa
GCA_030541605.1	JAUNZG000000000	SAMN36496308	GP1009	Thomasclavelia ramosa

SRA Data Details

Parameter	Value
Data volume, Gbases	55
Data volume, Mbytes	19002

BioProject

Result Filters

Display Settings:

Send to:

Various isolates of Bacteroides, Streptococcus, Clostridium, Klebsiella, Enterococcus, and E. coli. Genome sequencing and assembly

Supplemental Content

Related information

Recent activity