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Accession: PRJEB53556 ID: 849892

mApoSyl (European woodmouse)

Apodemus sylvaticus (wood mouse)

See Genome Information for Apodemus sylvaticus
This project collects the sequencing data and assemblies generated for Apodemus sylvaticus, common name wood mouse, to facilitate genome assembly and annotation as part of the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The data under this project are made available subject to the Darwin Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
AccessionPRJEB53556
TypeUmbrella project
OrganismApodemus sylvaticus[Taxonomy ID: 10129]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Apodemus; Sylvaemus group; Apodemus sylvaticus
SubmissionRegistration date: 16-Jun-2022
WELLCOME SANGER INSTITUTE
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)54663
WGS master2
Genomic DNA26
Transcript54113
SRA Experiments9
Protein Sequences46365
Other datasets
BioSample3
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases648
Data volume, Tbytes0.24
mApoSyl encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Scaffolds
Total

2
1
3
BioProject
accession
Assembly
level
OrganismTitle
PRJEB56947 ScaffoldsApodemus sylvaticusApodemus sylvaticus (wood mouse) genome assembly, mApoSyl1, alternate haplotype (WELLCOME SANGER INSTITUTE)
PRJEB56948 ChromosomesApodemus sylvaticusApodemus sylvaticus (wood mouse) genome assembly, mApoSyl1 (WELLCOME SANGER INSTITUTE)
PRJNA899886 ChromosomesApodemus sylvaticusApodemus sylvaticus RefSeq BioProject (NCBI)
Other1
BioProject
accession
OrganismTitle
PRJEB53555Apodemus sylvaticusApodemus sylvaticus (wood mouse), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE)

Supplemental Content

Recent activity

  • mApoSyl
    mApoSyl
    Apodemus sylvaticus (wood mouse)
    BioProject
  • mAcoRus1
    mAcoRus1
    Acomys russatus (golden spiny mouse)
    BioProject

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