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The snubnosed viper (Vipera latastei) is a species of venomous snake in the subfamily Viperinae of the family Viperidae. The species is endemic to the Iberian Peninsula and northwestern Maghreb (from Wikipedia entry). This sample of a male is from a collection at the Institute of Evolutionary Biology, Universitat Pompeu Fabra, in Barcelona Spain. It was procured by Tomas Marques-Bonet at the Universitat Pompeu Fabra, to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis. This assembly is under the limited use G10K embargo policy from the date of submission: https://genome10k.ucsc.edu/data-use-policies/
| Accession | PRJNA858072 |
| Type | Umbrella project |
| Organism | Vipera seoanei[Taxonomy ID: 110211] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Viperinae; Vipera; Vipera seoanei |
| Submission | Registration date: 12-Jul-2022
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 20 |
| WGS master | 2 |
| SRA Experiments | 23 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 2 |
| Assembly | 2 |
This project encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA838200 | Chromosomes | Vipera latastei | Vipera latastei (snub-nosed viber) genome, rVipLat1, primary haplotype (Vertebrate Genomes Project) | | PRJNA838199 | Scaffolds | Vipera latastei | Vipera latastei (snub-nosed viber) genome, rVipLat1, alternate haplotype (Vertebrate Genomes Project) |
|