ID 874473 - BioProject

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Accession: PRJNA874473 ID: 874473

Evolution of extended-spectrum beta-lactamase-producing Escherichia coli

Escherichia coli belonging to sequence type ST131 constitute a globally-distributed pandemic lineage that causes multidrug-resistant extra-intestinal infections. More...

Accession	PRJNA874473
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Evolution of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae (EPE) in the US and Japan Over the Past Two Decades" (Grant ID DAA3-19-65600-1, US Civilian Research & Development Foundation)
Submission	Registration date: 28-Aug-2022 University of Pittsburgh

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	88
SRA Experiments	64
Other datasets
BioSample	154
Assembly	88

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

88
88

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_025603135.1	JAOSCV000000000	SAMN30550049	DVT1299	Escherichia coli
GCA_025603115.1	JAOSCU000000000	SAMN30550050	DVT1300	Escherichia coli
GCA_025594105.1	JAOSFD000000000	SAMN30549989	DVT980	Escherichia coli
GCA_025594085.1	JAOSEI000000000	SAMN30550010	DVT1254	Escherichia coli
GCA_025594065.1	JAOSDI000000000	SAMN30550036	DVT1284	Escherichia coli
GCA_025594045.1	JAOSDH000000000	SAMN30550037	DVT1285	Escherichia coli
GCA_025594025.1	JAOSDG000000000	SAMN30550038	DVT1286	Escherichia coli
GCA_025594005.1	JAOSDE000000000	SAMN30550040	DVT1290	Escherichia coli
GCA_025593985.1	JAOSDF000000000	SAMN30550039	DVT1288	Escherichia coli
GCA_025593965.1	JAOSDD000000000	SAMN30550041	DVT1291	Escherichia coli
GCA_025593945.1	JAOSDC000000000	SAMN30550042	DVT1292	Escherichia coli
GCA_025593925.1	JAOSDB000000000	SAMN30550043	DVT1294	Escherichia coli
GCA_025593905.1	JAOSDA000000000	SAMN30550044	DVT1295	Escherichia coli
GCA_025593875.1	JAOSCZ000000000	SAMN30550045	DVT1304	Escherichia coli
GCA_025593865.1	JAOSCY000000000	SAMN30550046	DVT1305	Escherichia coli
GCA_025593845.1	JAOSCX000000000	SAMN30550047	DVT1297	Escherichia coli
GCA_025593805.1	JAOSCW000000000	SAMN30550048	DVT1298	Escherichia coli
GCA_025593785.1	JAOSCT000000000	SAMN30550051	DVT1301	Escherichia coli
GCA_025593765.1	JAOSCR000000000	SAMN30550053	EC00596	Escherichia coli
GCA_025593735.1	JAOSCS000000000	SAMN30550052	DVT1303	Escherichia coli
GCA_025593725.1	JAOSCQ000000000	SAMN30550054	EC00597	Escherichia coli
GCA_025593685.1	JAOSCO000000000	SAMN30550060	EC00609	Escherichia coli
GCA_025593705.1	JAOSCP000000000	SAMN30550058	EC00604	Escherichia coli
GCA_025593645.1	JAOSCM000000000	SAMN30550065	EC00617	Escherichia coli
GCA_025593655.1	JAOSCN000000000	SAMN30550062	EC00610	Escherichia coli
GCA_025593625.1	JAOSCL000000000	SAMN30550068	EC00625	Escherichia coli
GCA_025593605.1	JAOSCK000000000	SAMN30550071	EC00629	Escherichia coli
GCA_025593575.1	JAOSCJ000000000	SAMN30550074	EC00631	Escherichia coli
GCA_025593555.1	JAOSCI000000000	SAMN30550076	EC00635	Escherichia coli
GCA_025593535.1	JAOSCH000000000	SAMN30550077	EC00637	Escherichia coli
GCA_025593495.1	JAOSCG000000000	SAMN30550083	EC00661	Escherichia coli
GCA_025593475.1	JAOSCF000000000	SAMN30550085	EC00670	Escherichia coli
GCA_025593375.1	JAOSCA000000000	SAMN30550094	EC00685	Escherichia coli
GCA_025593355.1	JAOSBZ000000000	SAMN30550097	EC00687	Escherichia coli
GCA_025593335.1	JAOSBY000000000	SAMN30550098	EC00690	Escherichia coli
GCA_025593315.1	JAOSBX000000000	SAMN30550103	EC00695	Escherichia coli
GCA_025593295.1	JAOSBW000000000	SAMN30550128	EC00740	Escherichia coli
GCA_025593275.1	JAOSBV000000000	SAMN30550130	EC00750	Escherichia coli
GCA_025593255.1	JAOSBU000000000	SAMN30550140	EC00763	Escherichia coli
GCA_025593455.1	JAOSCD000000000	SAMN30550088	EC00674	Escherichia coli
GCA_025593435.1	JAOSCE000000000	SAMN30550087	EC00673	Escherichia coli
GCA_025593405.1	JAOSCC000000000	SAMN30550089	EC00675	Escherichia coli
GCA_025593395.1	JAOSCB000000000	SAMN30550091	EC00680	Escherichia coli
GCA_025584825.1	JAOSFB000000000	SAMN30549991	DVT994	Escherichia coli
GCA_025584805.1	JAOSFA000000000	SAMN30549992	DVT995	Escherichia coli
GCA_025584845.1	JAOSFC000000000	SAMN30549990	DVT979	Escherichia coli
GCA_025584785.1	JAOSEZ000000000	SAMN30549993	DVT996	Escherichia coli
GCA_025584665.1	JAOSES000000000	SAMN30550000	DVT1003	Escherichia coli
GCA_025584645.1	JAOSET000000000	SAMN30549999	DVT1002	Escherichia coli
GCA_025584625.1	JAOSEQ000000000	SAMN30550002	DVT1005	Escherichia coli
GCA_025584605.1	JAOSER000000000	SAMN30550001	DVT1004	Escherichia coli
GCA_025584585.1	JAOSEP000000000	SAMN30550003	DVT1006	Escherichia coli
GCA_025584565.1	JAOSEO000000000	SAMN30550004	DVT1007	Escherichia coli
GCA_025584545.1	JAOSEN000000000	SAMN30550005	DVT1012	Escherichia coli
GCA_025584525.1	JAOSEM000000000	SAMN30550006	DVT1248	Escherichia coli
GCA_025584505.1	JAOSEL000000000	SAMN30550007	DVT1250	Escherichia coli
GCA_025584485.1	JAOSEK000000000	SAMN30550008	DVT1252	Escherichia coli
GCA_025584465.1	JAOSEH000000000	SAMN30550011	DVT1255	Escherichia coli
GCA_025584445.1	JAOSEJ000000000	SAMN30550009	DVT1253	Escherichia coli
GCA_025584425.1	JAOSEF000000000	SAMN30550013	DVT1257	Escherichia coli
GCA_025584405.1	JAOSEG000000000	SAMN30550012	DVT1256	Escherichia coli
GCA_025584385.1	JAOSEE000000000	SAMN30550014	DVT1258	Escherichia coli
GCA_025584365.1	JAOSED000000000	SAMN30550015	DVT1259	Escherichia coli
GCA_025584345.1	JAOSEC000000000	SAMN30550016	DVT1260	Escherichia coli
GCA_025584325.1	JAOSEB000000000	SAMN30550017	DVT1261	Escherichia coli
GCA_025584305.1	JAOSDZ000000000	SAMN30550019	DVT1263	Escherichia coli
GCA_025584285.1	JAOSEA000000000	SAMN30550018	DVT1262	Escherichia coli
GCA_025584245.1	JAOSDY000000000	SAMN30550020	DVT1265	Escherichia coli
GCA_025584255.1	JAOSDX000000000	SAMN30550021	DVT1266	Escherichia coli
GCA_025584215.1	JAOSDW000000000	SAMN30550022	DVT1267	Escherichia coli
GCA_025584205.1	JAOSDV000000000	SAMN30550023	DVT1268	Escherichia coli
GCA_025584185.1	JAOSDU000000000	SAMN30550024	DVT1269	Escherichia coli
GCA_025584165.1	JAOSDT000000000	SAMN30550025	DVT1270	Escherichia coli
GCA_025584145.1	JAOSDS000000000	SAMN30550026	DVT1271	Escherichia coli
GCA_025584125.1	JAOSDR000000000	SAMN30550027	DVT1272	Escherichia coli
GCA_025584105.1	JAOSDQ000000000	SAMN30550028	DVT1274	Escherichia coli
GCA_025584085.1	JAOSDP000000000	SAMN30550029	DVT1275	Escherichia coli
GCA_025584065.1	JAOSDO000000000	SAMN30550030	DVT1276	Escherichia coli
GCA_025584045.1	JAOSDN000000000	SAMN30550031	DVT1277	Escherichia coli
GCA_025584025.1	JAOSDL000000000	SAMN30550033	DVT1280	Escherichia coli
GCA_025584005.1	JAOSDM000000000	SAMN30550032	DVT1278	Escherichia coli
GCA_025583975.1	JAOSDJ000000000	SAMN30550035	DVT1282	Escherichia coli
GCA_025583965.1	JAOSDK000000000	SAMN30550034	DVT1281	Escherichia coli
GCA_025584745.1	JAOSEW000000000	SAMN30549996	DVT999	Escherichia coli
GCA_025584725.1	JAOSEX000000000	SAMN30549995	DVT998	Escherichia coli
GCA_025584705.1	JAOSEV000000000	SAMN30549997	DVT1000	Escherichia coli
GCA_025584685.1	JAOSEU000000000	SAMN30549998	DVT1001	Escherichia coli
GCA_025584765.1	JAOSEY000000000	SAMN30549994	DVT997	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	27
Data volume, Mbytes	11793

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Evolution of extended-spectrum beta-lactamase-producing Escherichia coli

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