ID 886670 - BioProject

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Accession: PRJNA886670 ID: 886670

Rumen epithelial metagenome

Metagenome and genome sequencing from the rumen epithelial wall of dairy cattle.

Accession	PRJNA886670
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 3-Oct-2022 University of Veterinary Medicine Vienna
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	34
WGS master	31
Genomic DNA	3
SRA Experiments	14
Protein Sequences	4610
Other datasets
BioSample	48
Assembly	34

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Contig

Total

3
31
34

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_027738125.1	JAOVUJ000000000		SAMN31141435	Cn EL1	Campylobacter sp. CN_EL1
GCA_027738075.1	JAOVUI000000000		SAMN31141436	Cn EL2	Campylobacter sp. CN_EL2
GCA_027737865.1	JAOVUD000000000		SAMN31141442	Cn NA1	Campylobacter sp. CN_NA1
GCA_027738385.1	JAOVUH000000000		SAMN31141437	Cn NA2	Campylobacter sp. CN_NA2
GCA_027738065.1	JAOVUG000000000		SAMN31141439	Cn NE1	Campylobacter sp. CN_NE1
GCA_027797465.1		1	SAMN31141438	Cn NE2	Campylobacter sp. CN_NE2
GCA_027737945.1	JAOVUE000000000		SAMN31141441	Cn NE3	Campylobacter sp. CN_NE3
GCA_027737985.1	JAOVUF000000000		SAMN31141440	Cn NE4	Campylobacter sp. CN_NE4
GCA_027738295.1	JAOVUL000000000		SAMN31141432	Cs ED1	Campylobacter sp. CS_ED1
GCA_027738185.1	JAOVUK000000000		SAMN31141433	Cs ED2	Campylobacter sp. CS_ED2
GCA_027738265.1	JAOVUM000000000		SAMN31141431	Cs NA1	Campylobacter sp. CS_NA1
GCA_027738315.1	JAOVUN000000000		SAMN31141430	Cs NA2	Campylobacter sp. CS_NA2
GCA_027797495.1		1	SAMN31141434	Cs NA3	Campylobacter sp. CS_NA3
GCA_027737365.1	JAOVTR000000000		SAMN31141454	JMF_01 NE2	Campylobacter sp. JMF_01 NE2
GCA_027737625.1	JAOVTX000000000		SAMN31141448	JMF_02 ED1	Campylobacter sp. JMF_02 ED1
GCA_027737445.1	JAOVTS000000000		SAMN31141453	JMF_03 NE3	Campylobacter sp. JMF_03 NE3
GCA_027737655.1	JAOVTZ000000000		SAMN31141446	JMF_04 NA10	Campylobacter sp. JMF_04 NA10
GCA_027736975.1	JAOVTM000000000		SAMN31141460	JMF_05 ED3	Campylobacter sp. JMF_05 ED3
GCA_027737785.1	JAOVUA000000000		SAMN31141445	JMF_06 NA1	Campylobacter sp. JMF_06 NA1
GCA_027736985.1	JAOVTK000000000		SAMN31141462	JMF_07 ED4	Campylobacter sp. JMF_07 ED4
GCA_027737875.1	JAOVUC000000000		SAMN31141443	JMF_08 NE1	Campylobacter sp. JMF_08 NE1
GCA_027737145.1	JAOVTN000000000		SAMN31141459	JMF_09 ED2	Campylobacter sp. JMF_09 ED2
GCA_027737535.1	JAOVTV000000000		SAMN31141450	JMF_10 EL2	Campylobacter sp. JMF_10 EL2
GCA_027736965.1	JAOVTJ000000000		SAMN31141463	JMF_11 EL3	Campylobacter sp. JMF_11 EL3
GCA_027737585.1	JAOVTW000000000		SAMN31141449	JMF_14 EL1	Campylobacter sp. JMF_14 EL1
GCA_027737645.1	JAOVTY000000000		SAMN31141447	JMF_15 NE4	Campylobacter sp. JMF_15 NE4
GCA_027797205.1		1	SAMN31141458	VBCF_01 NA2	Campylobacter sp. VBCF_01 NA2
GCA_027737305.1	JAOVTP000000000		SAMN31141456	VBCF_02 NA5	Campylobacter sp. VBCF_02 NA5
GCA_027737105.1	JAOVTL000000000		SAMN31141461	VBCF_03 NA9	Campylobacter sp. VBCF_03 NA9
GCA_027737405.1	JAOVTT000000000		SAMN31141452	VBCF_04 NA7	Campylobacter sp. VBCF_04 NA7
GCA_027737485.1	JAOVTU000000000		SAMN31141451	VBCF_05 NA6	Campylobacter sp. VBCF_05 NA6
GCA_027737825.1	JAOVUB000000000		SAMN31141444	VBCF_06 NA8	Campylobacter sp. VBCF_06 NA8
GCA_027737225.1	JAOVTO000000000		SAMN31141457	VBCF_07 NA4	Campylobacter sp. VBCF_07 NA4
GCA_027737245.1	JAOVTQ000000000		SAMN31141455	VBCF_08 NA3	Campylobacter sp. VBCF_08 NA3

SRA Data Details

Parameter	Value
Data volume, Gbases	10
Data volume, Mbytes	3530

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