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Accession: PRJNA888096 ID: 888096

BioChIP-seq analysis of atrial and ventricular cardiomyocytes (house mouse)

See Genome Information for Mus musculus
Cardiac TF and P300 chromatin occupancy in atria and ventricles. Overall design: Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for cardiac TFs: Gata4, Mef2a, Mef2c, Tead1, Srf, Nkx2-5, Tbx3 and P300 in atrium and ventricle cardiomyocytes cells.
AccessionPRJNA888096; GEO: GSE215019
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsCao Y et al., "In Vivo Dissection of Chamber-Selective Enhancers Reveals Estrogen-Related Receptor as a Regulator of Ventricular Cardiomyocyte Identity.", Circulation, 2023 Mar 14;147(11):881-896
SubmissionRegistration date: 7-Oct-2022
Pu lab, Cardiology, Boston Children's Hospital
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments33
Publications
PubMed1
PMC1
Other datasets
BioSample33
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes11251
SRA Data Details
ParameterValue
Data volume, Gbases197
Data volume, Mbytes69188

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