U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA888100 ID: 888100

Generate 3D genome database for atrial and ventricles and using chamber selective chromatin loops link a subset of CSEs to target genes (house mouse)

See Genome Information for Mus musculus
Navigate Up
This project is a component of the Regulation of mouse chamber selective enhancers
Navigate Across
5 additional projects are components of the Regulation of mouse chamber selective enhancers.
70852 additional projects are related by organism.
Measurement the contribution of 3D genome structure to chamber specific transcriptional programs and CSE activity. Overall design: P0 aCMs and vCMs were isolated and purified for H3K27ac HiChIP.
AccessionPRJNA888100; GEO: GSE215020
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsCao Y et al., "In Vivo Dissection of Chamber-Selective Enhancers Reveals Estrogen-Related Receptor as a Regulator of Ventricular Cardiomyocyte Identity.", Circulation, 2023 Mar 14;147(11):881-896
SubmissionRegistration date: 7-Oct-2022
Pu lab, Cardiology, Boston Children's Hospital
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2005
SRA Data Details
ParameterValue
Data volume, Gbases584
Data volume, Tbytes0.19

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center