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Genome Information for Fragum whitleyi
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This project collects the sequencing data and assemblies generated for Fragum whitleyi, common name heart cockle, to facilitate genome assembly and annotation as part of the Aquatic Symbiosis Genomics (ASG) Project (https://www.aquaticsymbiosisgenomics.org/) from samples supplied by the ASG Photosymbiosis Hub (https://www.aquaticsymbiosisgenomics.org/collaborators/photosymbiosis-across-the-eukaryotic-tree-of-life/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB56739 |
| Type | Umbrella project |
| Organism | Fragum whitleyi[Taxonomy ID: 1699438] Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Cardiida; Cardioidea; Cardiidae; Fraginae; Fragum; Fragum whitleyi |
| Submission | Registration date: 16-Oct-2022
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 21 |
| WGS master | 2 |
| Genomic DNA | 19 |
| SRA Experiments | 6 |
| Other datasets |
| BioSample | 4 |
| Assembly | 2 |
xbFraWhit encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB58846 | Chromosomes | Fragum whitleyi | Fragum whitleyi (heart cockle) genome assembly, xbFraWhit1 (WELLCOME SANGER INSTITUTE) | | PRJEB58845 | Contigs | Fragum whitleyi | Fragum whitleyi (heart cockle) genome assembly, xbFraWhit1, alternate haplotype (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB56738 | Fragum whitleyi | Fragum whitleyi (heart cockle), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|