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Genome Information for Alternaria alternata
Host-pathogen interactions are the result of the continuously evolving dynamics of the genomic interphases between pathogens and host plants.
More...Host-pathogen interactions are the result of the continuously evolving dynamics of the genomic interphases between pathogens and host plants. Alternaria brown spot (ABS) caused by the pathogen Alternaria alternata is a serious threat to tangerine production. Although recent studies have made significant advances in the characterization of A. alternata virulence factors, a gap exists in the regulation of virulent genes throughout the course of A. alternata infection on host plants. To gain a better understanding of the dynamic defense transcriptome in Alternaria alternata during Infection, we performed a comparative transcriptome approach. After inoculation on citrus, we found that 2142, 1964, 2359 genes were up-regulated, and 1948, 1434, 1996 genes were down-regulated at 12 hours-post-inoculation (hpi), 24 hpi and 48 hpi, respectively. Among these genes, 1333 genes were up-regulated at three-time points, and 1054 genes were down-regulated, indicating that most of the differentially expressed genes at the early stage of infection tended to remain differentially expressed at the later stage of infection.
Less...Accession | PRJNA895027 |
Data Type | Genome sequencing and assembly, Raw sequence reads, Genome sequencing, Assembly, Clone ends, Epigenomics, Exome, Map, Metagenome, Metagenomic assembly, Phenotype or Genotype, Proteome, Random survey, Targeted Locus (Loci), Targeted loci cultured, Targeted loci environmental, Transcriptome or Gene expression, Variation |
Scope | Multiisolate |
Organism | Alternaria alternata[Taxonomy ID: 5599] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria; Alternaria sect. Alternaria; Alternaria alternata complex; Alternaria alternata |
Submission | Registration date: 27-Oct-2022 Beijing Forestry University |
Relevance | Agricultural |
Project Data:
Resource Name | Number of Links |
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BioSample | 4 |
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