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Genome Information for Harpia harpyja
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The harpy eagle (Harpia harpyja) is a neotropical species of eagle. It is one of the largest and most powerful eagles in the world. This sample of a female was obtained from the Sao Jose do Laguinho region in Brazil, procured by Tomas Hrbek and Guilherme Oliveira, to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis. This assembly is under the limited use G10K embargo policy from the date of submission: https://genome10k.ucsc.edu/data-use-policies/
| Accession | PRJNA903882 |
| Type | Umbrella project |
| Organism | Harpia harpyja[Taxonomy ID: 202280] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Harpia; Harpia harpyja |
| Grants | - "AmaZoomics" (Grant ID Oliveira, Vale Institute of Technology)
- "Vertebrate Genomes Project" (Grant ID Jarvis, Howard Hughes Medical Institute)
|
| Submission | Registration date: 21-Nov-2022
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 52025 |
| WGS master | 2 |
| Transcript | 51641 |
| SRA Experiments | 16 |
| Protein Sequences | 44808 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
2
1
1
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA896141 | Chromosomes | Harpia harpyja | Harpia harpyja (Harpy eagle) genome, bHarHar1, primary haplotype (Vertebrate Genomes Project) | | PRJNA896140 | Scaffolds | Harpia harpyja | Harpia harpyja (Harpy eagle) genome, bHarHar1, alternate haplotype (Vertebrate Genomes Project) | | PRJNA910140 | Chromosomes | Harpia harpyja | Harpia harpyja isolate:bHarHar1 RefSeq Genome sequencing and assembly (NCBI) | | PRJNA1008097 | SRA or Trace | Harpia harpyja (Harpy eagle) genome, bHarHar1, sequence data. | Harpia harpyja (Harpy eagle) genome, bHarHar1, sequence data. (G10K) |
|