ID 905044 - BioProject

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Accession: PRJEB57766 ID: 905044

EMG produced TPA metagenomics assembly of PRJNA691897 data set (Generation-scale evolution of the gut resistome under selective antibiotic pressure).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA691897, and was assembled with metaSPAdes v3. More...

Accession	PRJEB57766
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 24-Nov-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3017
WGS master	186
Publications
PubMed	1
PMC	1
Other datasets
BioSample	186
Assembly	186

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

186
186

Assembly	WGS	BioSample	Taxonomy
GCA_947642225.1	CANRSA000000000	SAMEA112227876	Acutalibacter muris
GCA_947652825.1	CANTEP000000000	SAMEA112227880	Akkermansia muciniphila
GCA_947653275.1	CANTGT000000000	SAMEA112227887	Anaerocolumna aminovalerica
GCA_947646815.1	CANSHW000000000	SAMEA112228006	Bacteroides acidifaciens
GCA_947565735.1	CANOHD000000000	SAMEA112227986	Bacteroides acidifaciens
GCA_947566245.1	CANOJG000000000	SAMEA112227997	Bacteroides acidifaciens
GCA_947566725.1	CANOKM000000000	SAMEA112227981	Bifidobacterium pseudolongum
GCA_947566355.1	CANOJP000000000	SAMEA112227885	Enterococcus faecalis
GCA_947565765.1	CANOHJ000000000	SAMEA112227878	Enterococcus gallinarum
GCA_947566405.1	CANOJW000000000	SAMEA112227953	Escherichia coli
GCA_947565955.1	CANOIC000000000	SAMEA112228011	Eubacterium plexicaudatum
GCA_947650625.1	CANSVX000000000	SAMEA112227908	Eubacterium plexicaudatum
GCA_947645285.1	CANSCG000000000	SAMEA112227863	Lactobacillus taiwanensis
GCA_947651785.1	CANTAS000000000	SAMEA112227965	Mucispirillum schaedleri
GCA_947566395.1	CANOJV000000000	SAMEA112227915	Muribaculum intestinale
GCA_947653485.1	CANTHB000000000	SAMEA112227873	Parabacteroides goldsteinii
GCA_947566315.1	CANOJN000000000	SAMEA112227910	Turicimonas muris
GCA_947653225.1	CANTGS000000000	SAMEA112227901	uncultured Acetatifactor sp.
GCA_947566305.1	CANOJK000000000	SAMEA112227947	uncultured Acetatifactor sp.
GCA_947644405.1	CANRZH000000000	SAMEA112228010	uncultured Alistipes sp.
GCA_947652165.1	CANTCC000000000	SAMEA112227849	uncultured Alistipes sp.
GCA_947565565.1	CANOGS000000000	SAMEA112227971	uncultured Alistipes sp.
GCA_947567275.1	CANOMB000000000	SAMEA112227978	uncultured Alistipes sp.
GCA_947565905.1	CANOHS000000000	SAMEA112227968	uncultured Alistipes sp.
GCA_947564695.1	CANOCW000000000	SAMEA112227903	uncultured Alistipes sp.
GCA_947566795.1	CANOKO000000000	SAMEA112227966	uncultured Alistipes sp.
GCA_947567535.1	CANOMM000000000	SAMEA112227946	uncultured Alistipes sp.
GCA_947565695.1	CANOHF000000000	SAMEA112227889	uncultured Anaerotruncus sp.
GCA_947565625.1	CANOGY000000000	SAMEA112227938	uncultured Angelakisella sp.
GCA_947565665.1	CANOGV000000000	SAMEA112227979	uncultured Azospirillum sp.
GCA_947566285.1	CANOJJ000000000	SAMEA112227845	uncultured Bacteroidales bacterium
GCA_947653005.1	CANTFF000000000	SAMEA112227990	uncultured Bacteroidales bacterium
GCA_947641555.1	CANRQS000000000	SAMEA112227969	uncultured Bacteroides sp.
GCA_947641625.1	CANRQQ000000000	SAMEA112227942	uncultured Bacteroides sp.
GCA_947565585.1	CANOGQ000000000	SAMEA112227991	uncultured Bacteroides sp.
GCA_947564775.1	CANOEN000000000	SAMEA112227920	uncultured Butyricicoccus sp.
GCA_947566445.1	CANOJY000000000	SAMEA112227897	uncultured Clostridia bacterium
GCA_947564205.1	CANOBR000000000	SAMEA112227955	uncultured Clostridia bacterium
GCA_947566455.1	CANOJX000000000	SAMEA112227940	uncultured Clostridia bacterium
GCA_947564905.1	CANOFA000000000	SAMEA112227954	uncultured Clostridia bacterium
GCA_947565025.1	CANOEU000000000	SAMEA112228016	uncultured Clostridia bacterium
GCA_947566435.1	CANOJZ000000000	SAMEA112227945	uncultured Clostridia bacterium
GCA_947566485.1	CANOKB000000000	SAMEA112227852	uncultured Clostridia bacterium
GCA_947566175.1	CANOIX000000000	SAMEA112228009	uncultured Clostridia bacterium
GCA_947566325.1	CANOJL000000000	SAMEA112227922	uncultured Clostridia bacterium
GCA_947565715.1	CANOHE000000000	SAMEA112227977	uncultured Clostridia bacterium
GCA_947565575.1	CANOGO000000000	SAMEA112227976	uncultured Clostridia bacterium
GCA_947565705.1	CANOHC000000000	SAMEA112227923	uncultured Clostridia bacterium
GCA_947566385.1	CANOJQ000000000	SAMEA112227933	uncultured Clostridia bacterium
GCA_947652225.1	CANTCH000000000	SAMEA112227882	uncultured Clostridia bacterium
GCA_947641785.1	CANRRE000000000	SAMEA112227957	uncultured Clostridia bacterium
GCA_947642165.1	CANRRQ000000000	SAMEA112227891	uncultured Clostridia bacterium
GCA_947651165.1	CANSYL000000000	SAMEA112227893	uncultured Clostridia bacterium
GCA_947646975.1	CANSIZ000000000	SAMEA112227985	uncultured Clostridia bacterium
GCA_947652245.1	CANTCI000000000	SAMEA112227937	uncultured Clostridia bacterium
GCA_947651835.1	CANTAV000000000	SAMEA112227952	uncultured Clostridia bacterium
GCA_947650735.1	CANSWI000000000	SAMEA112227973	uncultured Clostridiaceae bacterium
GCA_948356915.1	CAOJCG000000000	SAMEA112227840	uncultured Clostridiaceae bacterium
GCA_947565545.1	CANOGK000000000	SAMEA112227967	uncultured Clostridium sp.
GCA_947565555.1	CANOGL000000000	SAMEA112227987	uncultured Clostridium sp.
GCA_947564185.1	CANOBG000000000	SAMEA112227904	uncultured Clostridium sp.
GCA_947567715.1	CANOOF000000000	SAMEA112227963	uncultured Clostridium sp.
GCA_947564815.1	CANOCY000000000	SAMEA112227909	uncultured Clostridium sp.
GCA_947652865.1	CANTES000000000	SAMEA112227847	uncultured Clostridium sp.
GCA_947647015.1	CANSIP000000000	SAMEA112227982	uncultured Clostridium sp.
GCA_947646865.1	CANSIC000000000	SAMEA112228012	uncultured Clostridium sp.
GCA_947644815.1	CANSAT000000000	SAMEA112227932	uncultured Clostridium sp.
GCA_947644905.1	CANSAW000000000	SAMEA112227972	uncultured Coriobacteriaceae bacterium
GCA_947565145.1	CANODQ000000000	SAMEA112227836	uncultured Desulfovibrio sp.
GCA_947566425.1	CANOJU000000000	SAMEA112227888	uncultured Dorea sp.
GCA_947650575.1	CANSWC000000000	SAMEA112227890	uncultured Dorea sp.
GCA_947642135.1	CANRRS000000000	SAMEA112227884	uncultured Dorea sp.
GCA_947650645.1	CANSVS000000000	SAMEA112227894	uncultured Erysipelotrichaceae bacterium
GCA_947650825.1	CANSWV000000000	SAMEA112227900	uncultured Eubacterium sp.
GCA_947642195.1	CANRRW000000000	SAMEA112227919	uncultured Eubacterium sp.
GCA_947565615.1	CANOGP000000000	SAMEA112227850	uncultured Faecalibaculum sp.
GCA_947642365.1	CANRSI000000000	SAMEA112227846	uncultured Firmicutes bacterium
GCA_947642235.1	CANRRX000000000	SAMEA112227898	uncultured Firmicutes bacterium
GCA_947652815.1	CANTEN000000000	SAMEA112227875	uncultured Firmicutes bacterium
GCA_947642495.1	CANRST000000000	SAMEA112227926	uncultured Firmicutes bacterium
GCA_947565775.1	CANOHN000000000	SAMEA112227980	uncultured Firmicutes bacterium
GCA_947565745.1	CANOHH000000000	SAMEA112227892	uncultured Flavonifractor sp.
GCA_947651855.1	CANTAW000000000	SAMEA112227837	uncultured Hungatella sp.
GCA_947652145.1	CANTCE000000000	SAMEA112227877	uncultured Lachnoclostridium sp.
GCA_947652895.1	CANTEX000000000	SAMEA112227929	uncultured Lachnoclostridium sp.
GCA_947642525.1	CANRSO000000000	SAMEA112227914	uncultured Lachnoclostridium sp.
GCA_947653205.1	CANTGJ000000000	SAMEA112227864	uncultured Lachnospiraceae bacterium
GCA_948356865.1	CAOJCI000000000	SAMEA112227858	uncultured Lachnospiraceae bacterium
GCA_947564715.1	CANODV000000000	SAMEA112228014	uncultured Lachnospiraceae bacterium
GCA_947564535.1	CANODG000000000	SAMEA112227906	uncultured Lachnospiraceae bacterium
GCA_947566495.1	CANOKE000000000	SAMEA112227959	uncultured Lachnospiraceae bacterium
GCA_947564585.1	CANODA000000000	SAMEA112227917	uncultured Lachnospiraceae bacterium
GCA_947567495.1	CANOMT000000000	SAMEA112227879	uncultured Lachnospiraceae bacterium
GCA_947566235.1	CANOJF000000000	SAMEA112228003	uncultured Lachnospiraceae bacterium
GCA_947566375.1	CANOJS000000000	SAMEA112227899	uncultured Lachnospiraceae bacterium
GCA_947566805.1	CANOMV000000000	SAMEA112227941	uncultured Lachnospiraceae bacterium
GCA_947566505.1	CANOKF000000000	SAMEA112227960	uncultured Lachnospiraceae bacterium
GCA_947566465.1	CANOKA000000000	SAMEA112227869	uncultured Lachnospiraceae bacterium
GCA_947564215.1	CANOBH000000000	SAMEA112227949	uncultured Lachnospiraceae bacterium
GCA_947566165.1	CANOIW000000000	SAMEA112228000	uncultured Lachnospiraceae bacterium
GCA_947564435.1	CANOCG000000000	SAMEA112227870	uncultured Lachnospiraceae bacterium
GCA_947564545.1	CANOCP000000000	SAMEA112227925	uncultured Lachnospiraceae bacterium
GCA_947565205.1	CANOEZ000000000	SAMEA112227841	uncultured Lachnospiraceae bacterium
GCA_947565655.1	CANOGX000000000	SAMEA112227992	uncultured Lachnospiraceae bacterium
GCA_947566335.1	CANOJM000000000	SAMEA112227950	uncultured Lachnospiraceae bacterium
GCA_947565035.1	CANOFG000000000	SAMEA112227999	uncultured Lachnospiraceae bacterium
GCA_947651115.1	CANSYD000000000	SAMEA112227902	uncultured Lachnospiraceae bacterium
GCA_947644805.1	CANSBG000000000	SAMEA112227916	uncultured Lachnospiraceae bacterium
GCA_947644795.1	CANSBA000000000	SAMEA112227939	uncultured Lachnospiraceae bacterium
GCA_947643455.1	CANRVZ000000000	SAMEA112227854	uncultured Lachnospiraceae bacterium
GCA_947651995.1	CANTBL000000000	SAMEA112228007	uncultured Lachnospiraceae bacterium
GCA_947642315.1	CANRSU000000000	SAMEA112227907	uncultured Lachnospiraceae bacterium
GCA_947651815.1	CANTAT000000000	SAMEA112227833	uncultured Lachnospiraceae bacterium
GCA_947644995.1	CANSBK000000000	SAMEA112227924	uncultured Lachnospiraceae bacterium
GCA_947652285.1	CANTCN000000000	SAMEA112227871	uncultured Lachnospiraceae bacterium
GCA_947652055.1	CANTBU000000000	SAMEA112227993	uncultured Lachnospiraceae bacterium
GCA_947644975.1	CANSBH000000000	SAMEA112227951	uncultured Lachnospiraceae bacterium
GCA_947646845.1	CANSHZ000000000	SAMEA112228001	uncultured Lachnospiraceae bacterium
GCA_947652175.1	CANTCD000000000	SAMEA112227931	uncultured Lachnospiraceae bacterium
GCA_947652835.1	CANTEV000000000	SAMEA112227872	uncultured Lachnospiraceae bacterium
GCA_947652905.1	CANTEY000000000	SAMEA112227839	uncultured Lachnospiraceae bacterium
GCA_947646925.1	CANSIG000000000	SAMEA112228015	uncultured Lachnospiraceae bacterium
GCA_947641665.1	CANRRF000000000	SAMEA112227974	uncultured Lachnospiraceae bacterium
GCA_947565535.1	CANOGN000000000	SAMEA112227928	uncultured Lactobacillus sp.
GCA_947652195.1	CANTBX000000000	SAMEA112227868	uncultured Lactobacillus sp.
GCA_947644505.1	CANRZR000000000	SAMEA112228002	uncultured Mollicutes bacterium
GCA_947642245.1	CANRRR000000000	SAMEA112227996	uncultured Muribaculaceae bacterium
GCA_947652185.1	CANTCF000000000	SAMEA112227853	uncultured Muribaculaceae bacterium
GCA_947642385.1	CANRSM000000000	SAMEA112227866	uncultured Muribaculaceae bacterium
GCA_947652995.1	CANTFB000000000	SAMEA112227983	uncultured Muribaculaceae bacterium
GCA_947566475.1	CANOKC000000000	SAMEA112227862	uncultured Muribaculaceae bacterium
GCA_947567525.1	CANOMR000000000	SAMEA112227843	uncultured Muribaculaceae bacterium
GCA_947565595.1	CANOGR000000000	SAMEA112227934	uncultured Muribaculaceae bacterium
GCA_947565605.1	CANOGT000000000	SAMEA112227935	uncultured Muribaculaceae bacterium
GCA_947653305.1	CANTGF000000000	SAMEA112227865	uncultured Muribaculaceae bacterium
GCA_947653325.1	CANTGN000000000	SAMEA112227913	uncultured Muribaculaceae bacterium
GCA_948356855.1	CAOJCH000000000	SAMEA112227944	uncultured Muribaculaceae bacterium
GCA_947565965.1	CANOHZ000000000	SAMEA112228005	uncultured Mycoplasmatota bacterium
GCA_947567165.1	CANOLP000000000	SAMEA112227859	uncultured Odoribacter sp.
GCA_947644825.1	CANSBE000000000	SAMEA112227927	uncultured Oscillibacter sp.
GCA_947652715.1	CANTED000000000	SAMEA112227964	uncultured Oscillibacter sp.
GCA_947653245.1	CANTGR000000000	SAMEA112227860	uncultured Porphyromonadaceae bacterium
GCA_947566415.1	CANOJT000000000	SAMEA112227861	uncultured Porphyromonadaceae bacterium
GCA_947565895.1	CANOHV000000000	SAMEA112227970	uncultured Porphyromonadaceae bacterium
GCA_947565725.1	CANOHB000000000	SAMEA112227988	uncultured Porphyromonadaceae bacterium
GCA_947566295.1	CANOJI000000000	SAMEA112227844	uncultured Porphyromonadaceae bacterium
GCA_947566185.1	CANOIY000000000	SAMEA112227834	uncultured Porphyromonadaceae bacterium
GCA_947565645.1	CANOGW000000000	SAMEA112227962	uncultured Porphyromonadaceae bacterium
GCA_947565795.1	CANOHK000000000	SAMEA112227874	uncultured Porphyromonadaceae bacterium
GCA_947564515.1	CANODB000000000	SAMEA112227912	uncultured Porphyromonadaceae bacterium
GCA_947565815.1	CANOHM000000000	SAMEA112227989	uncultured Porphyromonadaceae bacterium
GCA_947566345.1	CANOJO000000000	SAMEA112227930	uncultured Porphyromonadaceae bacterium
GCA_947652885.1	CANTER000000000	SAMEA112227936	uncultured Porphyromonadaceae bacterium
GCA_947644485.1	CANRZP000000000	SAMEA112228018	uncultured Porphyromonadaceae bacterium
GCA_947652875.1	CANTEU000000000	SAMEA112227851	uncultured Porphyromonadaceae bacterium
GCA_947642285.1	CANRRY000000000	SAMEA112227855	uncultured Porphyromonadaceae bacterium
GCA_947652975.1	CANTFD000000000	SAMEA112227911	uncultured Porphyromonadaceae bacterium
GCA_947644875.1	CANSAU000000000	SAMEA112227943	uncultured Porphyromonadaceae bacterium
GCA_947641495.1	CANRQL000000000	SAMEA112227956	uncultured Porphyromonadaceae bacterium
GCA_947652915.1	CANTET000000000	SAMEA112227842	uncultured Prevotella sp.
GCA_947644375.1	CANRZE000000000	SAMEA112228004	uncultured Prevotella sp.
GCA_947651395.1	CANSYW000000000	SAMEA112227886	uncultured Pseudoflavonifractor sp.
GCA_947642275.1	CANRSC000000000	SAMEA112227835	uncultured Roseburia sp.
GCA_947566265.1	CANOJH000000000	SAMEA112227998	uncultured Roseburia sp.
GCA_947565825.1	CANOHP000000000	SAMEA112227995	uncultured Roseburia sp.
GCA_947565235.1	CANOFE000000000	SAMEA112227881	uncultured Roseburia sp.
GCA_947565755.1	CANOHG000000000	SAMEA112227984	uncultured Roseburia sp.
GCA_947565685.1	CANOHA000000000	SAMEA112227896	uncultured Turicibacter sp.
GCA_947642255.1	CANRRU000000000	SAMEA112227921	uncultured bacterium
GCA_947652275.1	CANTCM000000000	SAMEA112227848	uncultured bacterium
GCA_947645215.1	CANSCA000000000	SAMEA112227883	uncultured bacterium
GCA_947652755.1	CANTEH000000000	SAMEA112228008	uncultured bacterium
GCA_947644835.1	CANSAY000000000	SAMEA112227948	uncultured bacterium
GCA_947647075.1	CANSIY000000000	SAMEA112227994	uncultured bacterium
GCA_947642145.1	CANRRV000000000	SAMEA112227905	uncultured bacterium
GCA_947651225.1	CANSYK000000000	SAMEA112227895	uncultured bacterium
GCA_947641835.1	CANRRK000000000	SAMEA112227961	uncultured bacterium
GCA_947644985.1	CANSBJ000000000	SAMEA112227918	uncultured bacterium
GCA_947650675.1	CANSWH000000000	SAMEA112227975	uncultured bacterium
GCA_947566515.1	CANOKD000000000	SAMEA112227856	uncultured bacterium
GCA_947565845.1	CANOHQ000000000	SAMEA112228013	uncultured bacterium
GCA_947564795.1	CANODF000000000	SAMEA112228017	uncultured bacterium
GCA_947566365.1	CANOJR000000000	SAMEA112227857	uncultured bacterium
GCA_947564605.1	CANOCC000000000	SAMEA112227867	uncultured bacterium
GCA_947567265.1	CANOMZ000000000	SAMEA112227838	uncultured bacterium
GCA_947565055.1	CANOFH000000000	SAMEA112227958	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA691897 data set (Generation-scale evolution of the gut resistome under selective antibiotic pressure).

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