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Genome Information for Gastrophryne carolinensis
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The the eastern narrow-mouthed toad (Gastrophryne carolinensis) is actually not a toad, but a small microhylid frog, that like toads live in damp, terrestrial, shady habitats. It inhabits southern Maryland to the Florida Keys, west to Missouri and Texas (from Wikipedia entry). This sample is from an animal (unknown sex) at the Amphibian Conservation Research Center in Atlanta, Georgia, collected by Craig Hassapakis, coordinated by Andrew Crawford, Bob Murphy, and Spencer Livermore, and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, lead by Olivier Fedrigo and Erich D. Jarvis.
| Accession | PRJNA923362 |
| Type | Umbrella project |
| Organism | Gastrophryne carolinensis[Taxonomy ID: 8429] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Microhyloidea; Microhylidae; Gastrophryninae; Gastrophryne; Gastrophryne carolinensis |
| Submission | Registration date: 12-Jan-2023
Vertebrate Genomes Project |
| Relevance | Reference genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 24 |
| WGS master | 2 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 2 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes |
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA916748 | Chromosomes | Gastrophryne carolinensis | Gastrophryne carolinensis (Eastern narrow-mouthed toad) genome, aGasCar1, haplotype 1 (Vertebrate Genomes Project) | | PRJNA916749 | Chromosomes | Gastrophryne carolinensis | Gastrophryne carolinensis (Eastern narrow-mouthed toad) genome, aGasCar1, haplotype 2 (Vertebrate Genomes Project) |
|