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Genome Information for Melospiza georgiana
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The swamp sparrow (Melospiza georgiana) is a migratory New World sparrow, with breeding habitats in marshes across eastern North America and central Canada. This genome was generated from a sample collected by Jon Clark, sequenced and assembled at the Vertebrate Genome Lab led by Olivier Fedrigo and Erich D. Jarvis, in a project coordinated by Adrienne Kovach and Lindsey Fenderson, for a Vertebrate Genome Project (VGP) reference.
| Accession | PRJNA927021 |
| Type | Umbrella project |
| Organism | Melospiza georgiana[Taxonomy ID: 44398] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Melospiza; Melospiza georgiana |
| Submission | Registration date: 24-Jan-2023
Vertebrate Genomes Project |
| Relevance | Reference genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 29658 |
| WGS master | 2 |
| Transcript | 29544 |
| Protein Sequences | 27639 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs Total |
2
1
3
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA915609 | Chromosomes | Melospiza georgiana | Melospiza georgiana (swamp sparrow) genome, bMelGeo1, primary haplotype (Vertebrate Genomes Project) | | PRJNA915610 | Contigs | Melospiza georgiana | Melospiza georgiana (swamp sparrow) genome, bMelGeo1, alternative haplotype (Vertebrate Genomes Project) | | PRJNA990707 | Chromosomes | Melospiza georgiana | Melospiza georgiana isolate:bMelGeo1 RefSeq Genome sequencing and assembly (NCBI) |
|