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Accession: PRJNA928479 ID: 928479

Lycodopsis pacificus (blackbelly eelpout) genome, fLycPai1

See Genome Information for Lycodopsis pacificus
Blackbelly eelpouts (Lycodopsis pacificus) are Perciformes fishes, that inhabit the Eastern Pacific: from the Gulf of Alaska, south, to northern Baja California, Mexico. They are found on silty or sandy bottoms (from fishbase entry). This sample is from a female in Monterey Bay, California, collected by Scott Hamilton of the Moss Landing Marine Laboratories, coordinated by Joanna Kelley of Washington State University, and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University led by Olivier Fedrigo and Erich D. Jarvis. fLycPai1 was used instead of fLycPai1 assembly ID to distinguish it from Lycodapus pachysoma.
AccessionPRJNA928479
TypeUmbrella project
OrganismLycodopsis pacificus[Taxonomy ID: 1772091]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Zoarcales; Zoarcidae; Lycodinae; Lycodopsis; Lycodopsis pacificus
SubmissionRegistration date: 26-Jan-2023
Vertebrate Genomes Project
RelevanceReference genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)26
WGS master2
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly2
This project encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Scaffolds
Total

1
1
2
BioProject
accession
Assembly
level
OrganismTitle
PRJNA921713 ScaffoldsLycodopsis pacificusLycodopsis pacificus (blackbelly eelpout) genome, fLycPai1, haplotype 1 (Vertebrate Genomes Project)
PRJNA921714 ChromosomesLycodopsis pacificusLycodopsis pacificus (blackbelly eelpout) genome, fLycPai1, haplotype 2 (Vertebrate Genomes Project)

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