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Accession: PRJNA928730 ID: 928730

Pseudophryne corroboree (corroboree frog) for VGP genome, aPseCor3

See Genome Information for Pseudophryne corroboree
Corroboree frogs comprise two species native to the Southern Tablelands of Australia: Southern corroboree frog (Pseudophryne corroboree; this sample) and the Northern corroboree frog (Pseudophryne pengilleyi). Both species are small, poisonous ground-dwelling frogs, and are unique among frogs in that they produce their own poison rather than obtain it from their food source as is the case in every other poisonous frog species (from Wikipedia entry). The species are critically endangered of becoming extinct. This sample is from a male, bred in captivity, in Melbourne, Australia, as part of the conservation program. This sample was collected by Lee Berger, and the project coordinated by him, Andrew Crawford, Lee Skerratt, Tiffany Kosch, and others, to generate a high-quality diploid reference genome for the Vertebrate Genomes Project (VGP). More...
AccessionPRJNA928730
TypeUmbrella project
OrganismPseudophryne corroboree[Taxonomy ID: 495146]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Myobatrachoidea; Myobatrachidae; Myobatrachinae; Pseudophryne; Pseudophryne corroboree
SubmissionRegistration date: 27-Jan-2023
Vertebrate Genomes Project
RelevanceReference genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)143810
WGS master2
Transcript140657
SRA Experiments34
Protein Sequences51842
Publications
PubMed1
PMC1
Other datasets
BioSample3
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases1,700
Data volume, Tbytes0.79
This project encompasses the following 6 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Scaffolds
SRA or Trace
Total

2
1
3
6
BioProject
accession
Assembly
level
NameTitle
PRJNA921726 ChromosomesPseudophryne corroboreePseudophryne corroboree (corroboree frog) for VGP genome, aPseCor3, haplotype 2 (Vertebrate Genomes Project)
PRJNA921727 ScaffoldsPseudophryne corroboreePseudophryne corroboree (corroboree frog) for VGP genome, aPseCor3, haplotype 1 (Vertebrate Genomes Project)
PRJNA1082331 ChromosomesPseudophryne corroboreePseudophryne corroboree isolate:aPseCor3 RefSeq Genome sequencing and assembly (NCBI)
PRJNA1099243 SRA or TracePseudophryne corroboree (corroboree frog) genome, aPseCor1, sequence dataPseudophryne corroboree (corroboree frog) genome, aPseCor1, sequence data (Vertebrate Genomes Project)
PRJNA1099242 SRA or TracePseudophryne corroboree (corroboree frog) genome, aPseCor2, sequence dataPseudophryne corroboree (corroboree frog) genome, aPseCor2, sequence data (Vertebrate Genomes Project)
List all 6 'Genome sequencing' projects...

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