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Accession: PRJNA934396 ID: 934396

Mouse gut metagenome

Gnotobiotic consortium of pre-weaning mouse intestinal microbiome Genome sequencing and assembly

Gnotobiotic consortium of pre-weaning mouse intestinal microbiome (PedsCom).
AccessionPRJNA934396
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsLubin JB et al., "Arresting microbiome development limits immune system maturation and resistance to infection in mice.", Cell Host Microbe, 2023 Apr 12;31(4):554-570.e7
Grants
  • "Clinical Pharmacology Training Program" (Grant ID T32 GM008562, National Institute of General Medical Sciences)
  • "Bacterial Interference to Prevent Staphylococcus aureus Infection" (Grant ID R01 AI137526, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "A Pediatric Microbial Community to Dissect Host-Commensal Interactions in Type 1 Diabetes" (Grant ID R21 AI146629, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "Leveraging humoral immunity to promote commensal microbial protection from T1D" (Grant ID 5-CDA-2020-946-S-B, Juvenile Diabetes Research Foundation)
SubmissionRegistration date: 13-Feb-2023
Children's Hospital of Philadelphia
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)13
WGS master1
Genomic DNA12
SRA Experiments360
Protein Sequences27090
Publications
PubMed1
PMC1
Other datasets
BioSample369
Assembly9
SRA Data Details
ParameterValue
Data volume, Gbases7
Data volume, Mbytes4943

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