fAmmMar (ID 945765) - BioProject

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Accession: PRJEB60704 ID: 945765

fAmmMar (lesser sand-eel)

Ammodytes marinus (lesser sand-eel)

See Genome Information for Ammodytes marinus

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This project is a component of the Vertebrate Genomes Project

This project is a component of the The European Reference Genome Atlas Pilot Project

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530 additional projects are components of the Vertebrate Genomes Project.

30 additional projects are components of the The European Reference Genome Atlas Pilot Project.

This project collects the sequencing data and assemblies generated for Ammodytes marinus, common name lesser sand-eel, as part of the European Reference Genome Atlas Pilot Project (https://www.erga-biodiversity.eu/pilot-project). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/). The assembly is provided by the Wellcome Sanger Institute Tree of Life Programme (https://www.sanger.ac.uk/programme/tree-of-life/) in collaboration with Svein-Ole Mikalsen (The University of the Faroe Islands, species ambassador ERGA), Helga Bára Mohr Vang (Faroe Marine Research Institute) and the European Reference Genome Atlas Pilot Project team.

Accession	PRJEB60704
Type	Umbrella project
Organism	Ammodytes marinus[Taxonomy ID: 146480] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Uranoscopiformes; Ammodytidae; Ammodytes; Ammodytes marinus
Submission	Registration date: 17-Mar-2023 WELLCOME SANGER INSTITUTE

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	28
WGS master	2
Genomic DNA	26
SRA Experiments	4
Other datasets
BioSample	4
Assembly	2

SRA Data Details

Parameter	Value
Data volume, Gbases	169
Data volume, Mbytes	67979

fAmmMar encompasses the following 3 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Chromosomes
Scaffolds
Total

1
1
2

BioProject accession	Assembly level	Organism	Title
PRJEB61583	Scaffolds	Ammodytes marinus	Ammodytes marinus (lesser sand-eel) genome assembly, fAmmMar1, alternate haplotype (WELLCOME SANGER INSTITUTE)
PRJEB61584	Chromosomes	Ammodytes marinus	Ammodytes marinus (lesser sand-eel) genome assembly, fAmmMar1 (WELLCOME SANGER INSTITUTE)

Other

BioProject accession	Organism	Title
PRJEB60703	Ammodytes marinus	Ammodytes marinus (lesser sand-eel), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE)

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fAmmMar (lesser sand-eel)

Ammodytes marinus (lesser sand-eel)

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