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Accession: PRJNA976741 ID: 976741

Hypanus sabinus (Atlantic stingray) genome, sHypSab1

See Genome Information for Hypanus sabinus
The Atlantic stingray (Hypanus sabinus) is a species of stingray in the family Dasyatidae, common along the Atlantic coast of North America from Chesapeake Bay to Mexico, including brackish and freshwater habitats. It may be distinguished from other stingrays in the area by its relatively elongated snout. A homotypic synonomous species name is Dasyatis sabina. This genome is from a male in Gulf of Mexico, collected by Dean Grubbs, coordinated by Gavin Naylor at the University of Florida, and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
AccessionPRJNA976741
TypeUmbrella project
OrganismHypanus sabinus[Taxonomy ID: 79690]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Myliobatiformes; Dasyatidae; Hypanus; Hypanus sabinus
SubmissionRegistration date: 26-May-2023
Vertebrate Genomes Project
RelevanceReference genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)64016
WGS master2
Transcript60922
SRA Experiments12
Protein Sequences50984
Publications
PubMed1
PMC1
Other datasets
BioSample13
Assembly2
This project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes

3
BioProject
accession
Assembly
level
OrganismTitle
PRJNA924072 ChromosomesHypanus sabinusHypanus sabinus (Atlantic stingray) genome, sHypSab1, haplotype 1 (Vertebrate Genomes Project)
PRJNA924071 ChromosomesHypanus sabinusHypanus sabinus (Atlantic stingray) genome, sHypSab1, haplotype 2 (Vertebrate Genomes Project)
PRJNA1022099 ChromosomesHypanus sabinusHypanus sabinus isolate:sHypSab1 RefSeq Genome sequencing and assembly (NCBI)

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