Novel P450s from Antarctica (ID 979899) - BioProject

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Accession: PRJNA979899 ID: 979899

Novel P450s from Antarctica

Exploration of novel P450s in Antarctica through metagenomics

In this study, we have investigated the P450 diversity of metagenomes from Antarctica, and characterised a number of identified P450 sequences through experimental and bioinformatic analyses.

Accession	PRJNA979899
Data Type	Genome sequencing
Scope	Environment
Organism	freshwater sediment metagenome[Taxonomy ID: 556182] unclassified sequences; metagenomes; ecological metagenomes; freshwater sediment metagenome
Grants	"Discovery of Industrially Important Novel Cytochrome P450 Enzymes from Thermophilic Regions of Turkey, Australia and New Zealand" (Grant ID 1059B192100859, Scientifc and Technological Research Council of Turkey) "Alteration Profile of Admiralty Bay King George Island Antarctica Basalts Implication for Mars" (Grant ID 41729, ITU Scientifc Research Projects Division) "Effect of Extreme Conditions on Enzyme Profiles: Cytochrome P450 Systems as a case study" (Grant ID 42256, ITU Scientifc Research Projects Division) "Discovery of Novel Enzymes from Antarctica Samples by Metagenomic Approach" (Grant ID 42953, ITU Scientifc Research Projects Division) "Expression Optimization and Purification of Novel Cytochrome P450 Enzyme From Antarctica" (Grant ID 44197, ITU Scientifc Research Projects Division)
Submission	Registration date: 4-Jun-2023 University of Queensland
Relevance	Protein discovery

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	57
SRA Experiments	1
Other datasets
BioSample	58
Assembly	57

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

57
57

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_041691335.1	JBEPUX000000000	SAMN39828803	22E.metabat2_refined.030	Acidobacteriota bacterium
GCA_041690775.1	JBEPVW000000000	SAMN39828828	22E.semibin_refined.183	Acidobacteriota bacterium
GCA_041691275.1	JBEPUZ000000000	SAMN39828805	22E.metabat2_refined.036	Actinomycetota bacterium
GCA_041691755.1	JBEPTY000000000	SAMN39828778	22E.concoct.061	Alphaproteobacteria bacterium
GCA_041690915.1	JBEPVR000000000	SAMN39828823	22E.semibin_refined.123	Alphaproteobacteria bacterium
GCA_041690975.1	JBEPVO000000000	SAMN39828820	22E.semibin_refined.107_sub	Alphaproteobacteria bacterium
GCA_041691835.1	JBEPUA000000000	SAMN39828780	22E.concoct.079_sub	Antrihabitans sp.
GCA_041690815.1	JBEPVX000000000	SAMN39828829	22E.semibin_refined.186	Bacteroidota bacterium
GCA_041691055.1	JBEPVI000000000	SAMN39828814	22E.semibin_refined.007_sub	Bryobacterales bacterium
GCA_041690695.1	JBEPVZ000000000	SAMN39828831	22E.vamb.044	Candidatus Daviesbacteria bacterium
GCA_041691155.1	JBEPVD000000000	SAMN39828809	22E.metabat2_refined.090	Candidatus Dormiibacterota bacterium
GCA_041691135.1	JBEPVF000000000	SAMN39828811	22E.rosella_refined.299	Candidatus Peribacteria bacterium
GCA_041691795.1	JBEPTX000000000	SAMN39828777	22E.concoct.059	Candidatus Saccharibacteria bacterium
GCA_041691655.1	JBEPUE000000000	SAMN39828784	22E.concoct.103_sub	Caulobacteraceae bacterium
GCA_041691315.1	JBEPUW000000000	SAMN39828802	22E.metabat2_refined.029	Caulobacteraceae bacterium
GCA_041691395.1	JBEPUT000000000	SAMN39828799	22E.metabat2_refined.007	Chitinophagaceae bacterium
GCA_041691715.1	JBEPUD000000000	SAMN39828783	22E.concoct.095	Chitinophagaceae bacterium
GCA_041691235.1	JBEPVC000000000	SAMN39828808	22E.metabat2_refined.086_sub	Chitinophagaceae bacterium
GCA_041691175.1	JBEPVG000000000	SAMN39828812	22E.semibin_refined.001	Chitinophagaceae bacterium
GCA_041691035.1	JBEPVL000000000	SAMN39828817	22E.semibin_refined.032	Chlamydiota bacterium
GCA_041691215.1	JBEPVB000000000	SAMN39828807	22E.metabat2_refined.055	Chloroflexota bacterium
GCA_041691195.1	JBEPVE000000000	SAMN39828810	22E.rosella_refined.284	Chloroflexota bacterium
GCA_041691435.1	JBEPUS000000000	SAMN39828798	22E.metabat2_refined.006	Chloroflexota bacterium
GCA_041691735.1	JBEPUF000000000	SAMN39828785	22E.concoct.107	Deltaproteobacteria bacterium
GCA_041691695.1	JBEPUG000000000	SAMN39828786	22E.concoct.115	Flavobacteriales bacterium
GCA_041691075.1	JBEPVK000000000	SAMN39828816	22E.semibin_refined.029_sub	Gammaproteobacteria bacterium
GCA_041690995.1	JBEPVM000000000	SAMN39828818	22E.semibin_refined.037	Gammaproteobacteria bacterium
GCA_041690875.1	JBEPVS000000000	SAMN39828824	22E.semibin_refined.145	Gammaproteobacteria bacterium
GCA_041690895.1	JBEPVT000000000	SAMN39828825	22E.semibin_refined.153_sub	Gammaproteobacteria bacterium
GCA_041690855.1	JBEPVU000000000	SAMN39828826	22E.semibin_refined.170	Gammaproteobacteria bacterium
GCA_041690755.1	JBEPWA000000000	SAMN39828832	22E.vamb.053	Gemmatimonadaceae bacterium
GCA_041691095.1	JBEPVJ000000000	SAMN39828815	22E.semibin_refined.014_sub	Gemmatimonadales bacterium
GCA_041691295.1	JBEPVA000000000	SAMN39828806	22E.metabat2_refined.046	Gemmatimonadota bacterium
GCA_041690795.1	JBEPVV000000000	SAMN39828827	22E.semibin_refined.177_sub	Gemmatimonadota bacterium
GCA_041691775.1	JBEPUB000000000	SAMN39828781	22E.concoct.088	Gemmatimonadota bacterium
GCA_041691255.1	JBEPUY000000000	SAMN39828804	22E.metabat2_refined.034_sub	Granulicella sp.
GCA_041691675.1	JBEPUC000000000	SAMN39828782	22E.concoct.092_sub	Hyphomicrobiales bacterium
GCA_041691635.1	JBEPUH000000000	SAMN39828787	22E.maxbin.003	Hyphomicrobiales bacterium
GCA_041691375.1	JBEPUV000000000	SAMN39828801	22E.metabat2_refined.015	Mycobacteriales bacterium
GCA_041690945.1	JBEPVQ000000000	SAMN39828822	22E.semibin_refined.122	Nitrososphaeraceae archaeon
GCA_041691015.1	JBEPVN000000000	SAMN39828819	22E.semibin_refined.077	Parachlamydiaceae bacterium
GCA_041691455.1	JBEPUO000000000	SAMN39828794	22E.metabat_sspec.004_sub	Phenylobacterium sp.
GCA_041691515.1	JBEPUM000000000	SAMN39828792	22E.metabat_sens.013_sub	Pseudomonadota bacterium
GCA_041691495.1	JBEPUP000000000	SAMN39828795	22E.metabat_sspec.006_sub	Pseudomonadota bacterium
GCA_041691415.1	JBEPUR000000000	SAMN39828797	22E.metabat_sspec.010_sub	Pseudomonadota bacterium
GCA_041691615.1	JBEPUI000000000	SAMN39828788	22E.maxbin.011	Pseudomonadota bacterium
GCA_041691475.1	JBEPUQ000000000	SAMN39828796	22E.metabat_sspec.008_sub	Pseudonocardia sp.
GCA_041690935.1	JBEPVP000000000	SAMN39828821	22E.semibin_refined.119	Rhodanobacter sp.
GCA_041691815.1	JBEPTZ000000000	SAMN39828779	22E.concoct.072	Rhodospirillales bacterium
GCA_041691535.1	JBEPUN000000000	SAMN39828793	22E.metabat_sens.047_sub	Rickettsiaceae bacterium
GCA_041691575.1	JBEPUJ000000000	SAMN39828789	22E.maxbin.012	Terriglobales bacterium
GCA_041691855.1	JBEPTW000000000	SAMN39828776	22E.concoct.012	Verrucomicrobiota bacterium
GCA_041691595.1	JBEPUK000000000	SAMN39828790	22E.maxbin.021_sub	Verrucomicrobiota bacterium
GCA_041690835.1	JBEPVY000000000	SAMN39828830	22E.semibin_refined.189_sub	Vulcanimicrobiota bacterium
GCA_041691115.1	JBEPVH000000000	SAMN39828813	22E.semibin_refined.006_sub	bacterium
GCA_041691555.1	JBEPUL000000000	SAMN39828791	22E.metabat_sens.003_sub	bacterium
GCA_041691355.1	JBEPUU000000000	SAMN39828800	22E.metabat2_refined.014_sub	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	37
Data volume, Mbytes	15290

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Novel P450s from Antarctica

Exploration of novel P450s in Antarctica through metagenomics

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