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Accession: PRJEB62827 ID: 980539

EMG produced TPA metagenomics assembly of PRJEB38997 data set (Associations between the gut microbiome and the development of retinopathia centralis serosa).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJEB38997, and was assembled with metaspades v3. More...
AccessionPRJEB62827
Data TypeGenome sequencing and assembly
ScopeMonoisolate
KeywordTPA:assembly
PublicationsMitchell AL et al., "MGnify: the microbiome analysis resource in 2020.", Nucleic Acids Res, 2020 Jan 8;48(D1):D570-D578
SubmissionRegistration date: 6-Jun-2023
EMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)15190
WGS master416
Publications
PubMed1
PMC1
Other datasets
BioSample416
Assembly416
Assembly details:
Assembly levelNumber of Assemblies
415
415
AssemblyLevelWGSBioSampleTaxonomy
GCA_958350355.1ContigCATWGP000000000SAMEA114062352
GCA_958441805.1ContigCAUCEM000000000SAMEA114062116
GCA_958353675.1ContigCATWTI000000000SAMEA114062335
GCA_958439895.1ContigCAUBWY000000000SAMEA114062090
GCA_958353875.1ContigCATWUC000000000SAMEA114062207
GCA_958442065.1ContigCAUCFQ000000000SAMEA114062181
GCA_958441985.1ContigCAUCFC000000000SAMEA114062190
GCA_958440095.1ContigCAUBXW000000000SAMEA114062199
GCA_958443625.1ContigCAUCLK000000000SAMEA114062405
GCA_958442595.1ContigCAUCHM000000000SAMEA114062415
GCA_958442015.1ContigCAUCFE000000000SAMEA114062188
GCA_958352915.1ContigCATWQL000000000SAMEA114062066
GCA_958440215.1ContigCAUBYH000000000SAMEA114062324
GCA_958439785.1ContigCAUBWR000000000SAMEA114062074
GCA_958439945.1ContigCAUBXI000000000SAMEA114062121
GCA_958352755.1ContigCATWPV000000000SAMEA114062055
GCA_958440205.1ContigCAUBYJ000000000SAMEA114062259
GCA_958442525.1ContigCAUCHF000000000SAMEA114062393
GCA_958442195.1ContigCAUCGF000000000SAMEA114062241
GCA_958350425.1ContigCATWGT000000000SAMEA114062375
GCA_958442105.1ContigCAUCFN000000000SAMEA114062229
GCA_958350335.1ContigCATWGN000000000SAMEA114062242
GCA_958449095.1ContigCAUDGP000000000SAMEA114062047
GCA_958352525.1ContigCATWOY000000000SAMEA114062305
GCA_958443945.1ContigCAUCMU000000000SAMEA114062377
GCA_958353815.1ContigCATWTV000000000SAMEA114062247
GCA_958350615.1ContigCATWHO000000000SAMEA114062128
GCA_958439875.1ContigCAUBXB000000000SAMEA114062096
GCA_958352045.1ContigCATWNC000000000SAMEA114062385
GCA_958443655.1ContigCAUCLM000000000SAMEA114062424
GCA_958443445.1ContigCAUCKU000000000SAMEA114062135
GCA_958442215.1ContigCAUCGC000000000SAMEA114062256
GCA_958440345.1ContigCAUBYV000000000SAMEA114062355
GCA_958352485.1ContigCATWOW000000000SAMEA114062348
GCA_958352665.1ContigCATWPN000000000SAMEA114062091
GCA_958441125.1ContigCAUCBU000000000SAMEA114062061
GCA_958441675.1ContigCAUCDX000000000SAMEA114062078
GCA_958441995.1ContigCAUCFI000000000SAMEA114062166
GCA_958441145.1ContigCAUCBY000000000SAMEA114062068
GCA_958351845.1ContigCATWMM000000000SAMEA114062304
GCA_958440045.1ContigCAUBXS000000000SAMEA114062182
GCA_958447315.1ContigCAUCZO000000000SAMEA114062351
GCA_958439905.1ContigCAUBXC000000000SAMEA114062100
GCA_958440275.1ContigCAUBYQ000000000SAMEA114062333
GCA_958351895.1ContigCATWML000000000SAMEA114062380
GCA_958447255.1ContigCAUCZI000000000SAMEA114062317
GCA_958352035.1ContigCATWNB000000000SAMEA114062205
GCA_958442455.1ContigCAUCGY000000000SAMEA114062363
GCA_958440395.1ContigCAUBZD000000000SAMEA114062364
GCA_958352585.1ContigCATWPD000000000SAMEA114062176
GCA_958442085.1ContigCAUCFM000000000SAMEA114062236
GCA_958442035.1ContigCAUCFH000000000SAMEA114062202
GCA_958440135.1ContigCAUBXZ000000000SAMEA114062214
GCA_958352385.1ContigCATWOJ000000000SAMEA114062376
GCA_958352765.1ContigCATWQD000000000SAMEA114062069
GCA_958447295.1ContigCAUCZR000000000SAMEA114062322
GCA_958443775.1ContigCAUCMB000000000SAMEA114062277
GCA_958447115.1ContigCAUCYT000000000SAMEA114062263
GCA_958350545.1ContigCATWHG000000000SAMEA114062378
GCA_958442095.1ContigCAUCFL000000000SAMEA114062210
GCA_958441655.1ContigCAUCDT000000000SAMEA114062017
GCA_958447025.1ContigCAUCYI000000000SAMEA114062238
GCA_958350495.1ContigCATWHB000000000SAMEA114062155
GCA_958443595.1ContigCAUCLJ000000000SAMEA114062387
GCA_958441855.1ContigCAUCEQ000000000SAMEA114062118
GCA_958352795.1ContigCATWPZ000000000SAMEA114062044
GCA_958352745.1ContigCATWPU000000000SAMEA114062071
GCA_958441825.1ContigCAUCEN000000000SAMEA114062117
GCA_958350675.1ContigCATWHX000000000SAMEA114062225
GCA_958441875.1ContigCAUCEU000000000SAMEA114062126
GCA_958440355.1ContigCAUBZB000000000SAMEA114062325
GCA_958352455.1ContigCATWOT000000000SAMEA114062280
GCA_958351855.1ContigCATWMN000000000SAMEA114062285
GCA_958353835.1ContigCATWTZ000000000SAMEA114062295
GCA_958442185.1ContigCAUCFX000000000SAMEA114062255
GCA_958447325.1ContigCAUCZP000000000SAMEA114062357
GCA_958350345.1ContigCATWGM000000000SAMEA114062224
GCA_958439995.1ContigCAUBXM000000000SAMEA114062162
GCA_958447215.1ContigCAUCZG000000000SAMEA114062250
GCA_958443485.1ContigCAUCKY000000000SAMEA114062179
GCA_958352405.1ContigCATWOM000000000SAMEA114062359
GCA_958441275.1ContigCAUCCG000000000SAMEA114062059
GCA_958442535.1ContigCAUCHG000000000SAMEA114062401
GCA_958353795.1ContigCATWTW000000000SAMEA114062254
GCA_958440025.1ContigCAUBXQ000000000SAMEA114062177
GCA_958447035.1ContigCAUCYL000000000SAMEA114062164
GCA_958350465.1ContigCATWHA000000000SAMEA114062246
GCA_958352435.1ContigCATWOP000000000SAMEA114062306
GCA_958440365.1ContigCAUBYW000000000SAMEA114062372
GCA_958440325.1ContigCAUBYX000000000SAMEA114062353
GCA_958439865.1ContigCAUBXD000000000SAMEA114062115
GCA_958441775.1ContigCAUCEI000000000SAMEA114062111
GCA_958440225.1ContigCAUBYG000000000SAMEA114062313
GCA_958352295.1ContigCATWOB000000000SAMEA114062320
GCA_958441885.1ContigCAUCEV000000000SAMEA114062120
GCA_958440445.1ContigCAUBZG000000000SAMEA114062366
GCA_958440065.1ContigCAUBXR000000000SAMEA114062211
GCA_958442335.1ContigCAUCGK000000000SAMEA114062343
GCA_958441915.1ContigCAUCEY000000000SAMEA114062122
GCA_958351835.1ContigCATWMH000000000SAMEA114062294
GCA_958443605.1ContigCAUCLN000000000SAMEA114062373
GCA_958350645.1ContigCATWHR000000000SAMEA114062113
GCA_958439815.1ContigCAUBWW000000000SAMEA114062133
GCA_958447265.1ContigCAUCZM000000000SAMEA114062318
GCA_958442045.1ContigCAUCFJ000000000SAMEA114062212
GCA_958440315.1ContigCAUBYT000000000SAMEA114062300
GCA_958442175.1ContigCAUCFW000000000SAMEA114062222
GCA_958441595.1ContigCAUCDN000000000SAMEA114062083
GCA_958350635.1ContigCATWHQ000000000SAMEA114062194
GCA_958443515.1ContigCAUCLB000000000SAMEA114062319
GCA_958350205.1ContigCATWFW000000000SAMEA114062398
GCA_958353735.1ContigCATWTN000000000SAMEA114062257
GCA_958441845.1ContigCAUCEP000000000SAMEA114062092
GCA_958439965.1ContigCAUBXJ000000000SAMEA114062172
GCA_958350835.1ContigCATWIL000000000SAMEA114062084
GCA_958441905.1ContigCAUCES000000000SAMEA114062159
GCA_958441115.1ContigCAUCBW000000000SAMEA114062054
GCA_958442145.1ContigCAUCFV000000000SAMEA114062197
GCA_958352115.1ContigCATWNI000000000SAMEA114062157
GCA_958442685.1ContigCAUCHU000000000SAMEA114062362
GCA_958440265.1ContigCAUBYN000000000SAMEA114062258
GCA_958442245.1ContigCAUCGD000000000SAMEA114062249
GCA_958442485.1ContigCAUCHD000000000SAMEA114062389
GCA_958442225.1ContigCAUCFY000000000SAMEA114062289
GCA_958447125.1ContigCAUCYW000000000SAMEA114062264
GCA_958439805.1ContigCAUBWU000000000SAMEA114062082
GCA_958439755.1ContigCAUBWN000000000SAMEA114062102
GCA_958441935.1ContigCAUCEW000000000SAMEA114062168
GCA_958365065.1ContigCATWWD000000000SAMEA114062040
GCA_958350385.1ContigCATWGR000000000SAMEA114062430
GCA_958443665.1ContigCAUCLQ000000000SAMEA114062298
GCA_958442585.1ContigCAUCHL000000000SAMEA114062394
GCA_958447195.1ContigCAUCZE000000000SAMEA114062271
GCA_958351735.1ContigCATWLW000000000SAMEA114062416
GCA_958443785.1ContigCAUCLZ000000000SAMEA114062427
GCA_958442435.1ContigCAUCGW000000000SAMEA114062381
GCA_958442665.1ContigCAUCHW000000000SAMEA114062299
GCA_958443555.1ContigCAUCLE000000000SAMEA114062383
GCA_958350765.1ContigCATWIE000000000SAMEA114062193
GCA_958439845.1ContigCAUBWX000000000SAMEA114062093
GCA_958447075.1ContigCAUCYV000000000SAMEA114062198
GCA_958350605.1ContigCATWHP000000000SAMEA114062136
GCA_958350555.1ContigCATWHJ000000000SAMEA114062192
GCA_958350865.1ContigCATWIO000000000SAMEA114062124
GCA_958352355.1ContigCATWOL000000000SAMEA114062330
GCA_958443505.1ContigCAUCKZ000000000SAMEA114062227
GCA_958447165.1ContigCAUCZB000000000SAMEA114062244
GCA_958447475.1ContigCAUDAH000000000SAMEA114062403
GCA_958441695.1ContigCAUCDZ000000000SAMEA114062098
GCA_958440245.1ContigCAUBYL000000000SAMEA114062262
GCA_958445555.1ContigCAUCSW000000000SAMEA114062029
GCA_958445575.1ContigCAUCSY000000000SAMEA114062031
GCA_958445415.1ContigCAUCSI000000000SAMEA114062042
GCA_958442495.1ContigCAUCHA000000000SAMEA114062390
GCA_958442445.1ContigCAUCGV000000000SAMEA114062367
GCA_958442555.1ContigCAUCHI000000000SAMEA114062365
GCA_958440115.1ContigCAUBXX000000000SAMEA114062240
GCA_958442255.1ContigCAUCGG000000000SAMEA114062251
GCA_958443435.1ContigCAUCKS000000000SAMEA114062215
GCA_958352105.1ContigCATWNH000000000SAMEA114062018
GCA_958350655.1ContigCATWHS000000000SAMEA114062268
GCA_958350735.1ContigCATWIC000000000SAMEA114062201
GCA_958352595.1ContigCATWPG000000000SAMEA114062150
GCA_958352555.1ContigCATWPB000000000SAMEA114062130
GCA_958353655.1ContigCATWTG000000000SAMEA114062347
GCA_958353775.1ContigCATWTT000000000SAMEA114062361
GCA_958352465.1ContigCATWOR000000000SAMEA114062200
GCA_958443585.1ContigCAUCLH000000000SAMEA114062358
GCA_958443635.1ContigCAUCLO000000000SAMEA114062269
GCA_958443575.1ContigCAUCLF000000000SAMEA114062408
GCA_958443305.1ContigCAUCKF000000000SAMEA114062019
GCA_958447135.1ContigCAUCYY000000000SAMEA114062297
GCA_958447235.1ContigCAUCZK000000000SAMEA114062315
GCA_958447095.1ContigCAUCYU000000000SAMEA114062235
GCA_958448565.1ContigCAUDEI000000000SAMEA114062038
GCA_958440285.1ContigCAUBYO000000000SAMEA114062368
GCA_958442405.1ContigCAUCGT000000000SAMEA114062310
GCA_958441725.1ContigCAUCEA000000000SAMEA114062104
GCA_958440105.1ContigCAUBXY000000000SAMEA114062213
GCA_958440125.1ContigCAUBYB000000000SAMEA114062223
GCA_958441165.1ContigCAUCBZ000000000SAMEA114062043
GCA_958439935.1ContigCAUBXG000000000SAMEA114062129
GCA_958440235.1ContigCAUBYK000000000SAMEA114062278
GCA_958447445.1ContigCAUDAE000000000SAMEA114062419
GCA_958439775.1ContigCAUBWQ000000000SAMEA114062063
GCA_958443615.1ContigCAUCLI000000000SAMEA114062369
GCA_958442395.1ContigCAUCGS000000000SAMEA114062286
GCA_958350685.1ContigCATWHV000000000SAMEA114062163
GCA_958447375.1ContigCAUCZW000000000SAMEA114062339
GCA_958439765.1ContigCAUBWO000000000SAMEA114062080
GCA_958352445.1ContigCATWOQ000000000SAMEA114062208
GCA_958352605.1ContigCATWPH000000000SAMEA114062226
GCA_958350815.1ContigCATWIM000000000SAMEA114062158
GCA_958351955.1ContigCATWMR000000000SAMEA114062026
GCA_958351935.1ContigCATWMS000000000SAMEA114062413
GCA_958447155.1ContigCAUCZC000000000SAMEA114062266
GCA_958443475.1ContigCAUCKW000000000SAMEA114062147
GCA_958443735.1ContigCAUCLW000000000SAMEA114062426
GCA_958443455.1ContigCAUCKT000000000SAMEA114062144
GCA_958443425.1ContigCAUCKQ000000000SAMEA114062252
GCA_958443545.1ContigCAUCLD000000000SAMEA114062340
GCA_958439795.1ContigCAUBWS000000000SAMEA114062073
GCA_958441945.1ContigCAUCFA000000000SAMEA114062169
GCA_958441815.1ContigCAUCEO000000000SAMEA114062101
GCA_958443405.1ContigCAUCKP000000000SAMEA114062217
GCA_958441895.1ContigCAUCET000000000SAMEA114062131
GCA_958353245.1ContigCATWRR000000000SAMEA114062030
GCA_958353225.1ContigCATWRV000000000SAMEA114062033
GCA_958352615.1ContigCATWPE000000000SAMEA114062094
GCA_958352545.1ContigCATWPA000000000SAMEA114062151
GCA_958352565.1ContigCATWPF000000000SAMEA114062125
GCA_958352315.1ContigCATWOD000000000SAMEA114062284
GCA_958352425.1ContigCATWOO000000000SAMEA114062323
GCA_958352345.1ContigCATWOG000000000SAMEA114062336
GCA_958352495.1ContigCATWOU000000000SAMEA114062171
GCA_958350695.1ContigCATWHZ000000000SAMEA114062099
GCA_958350665.1ContigCATWHT000000000SAMEA114062109
GCA_958350625.1ContigCATWIA000000000SAMEA114062072
GCA_958350595.1ContigCATWHN000000000SAMEA114062081
GCA_958350585.1ContigCATWHU000000000SAMEA114062146
GCA_958350525.1ContigCATWHF000000000SAMEA114062282
GCA_958350475.1ContigCATWGZ000000000SAMEA114062334
GCA_958351765.1ContigCATWLZ000000000SAMEA114062414
GCA_958350855.1ContigCATWIN000000000SAMEA114062149
GCA_958351915.1ContigCATWMP000000000SAMEA114062308
GCA_958351975.1ContigCATWMV000000000SAMEA114062291
GCA_958449085.1ContigCAUDGJ000000000SAMEA114062050
GCA_958441265.1ContigCAUCCH000000000SAMEA114062057
GCA_958441255.1ContigCAUCCL000000000SAMEA114062060
GCA_958441225.1ContigCAUCCD000000000SAMEA114062046
GCA_958441195.1ContigCAUCCB000000000SAMEA114062052
GCA_958441135.1ContigCAUCBV000000000SAMEA114062064
GCA_958442475.1ContigCAUCHC000000000SAMEA114062379
GCA_958442425.1ContigCAUCGU000000000SAMEA114062345
GCA_958441065.1ContigCAUCBO000000000SAMEA114062058
GCA_958441705.1ContigCAUCEB000000000SAMEA114062103
GCA_958441625.1ContigCAUCDS000000000SAMEA114062025
GCA_958442165.1ContigCAUCFU000000000SAMEA114062243
GCA_958441745.1ContigCAUCEF000000000SAMEA114062089
GCA_958442365.1ContigCAUCGO000000000SAMEA114062329
GCA_958442305.1ContigCAUCGJ000000000SAMEA114062281
GCA_958440375.1ContigCAUBYU000000000SAMEA114062349
GCA_958439835.1ContigCAUBWT000000000SAMEA114062123
GCA_958439925.1ContigCAUBXF000000000SAMEA114062107
GCA_958439885.1ContigCAUBWZ000000000SAMEA114062095
GCA_958440085.1ContigCAUBXV000000000SAMEA114062206
GCA_958440175.1ContigCAUBYF000000000SAMEA114062248
GCA_958440155.1ContigCAUBYC000000000SAMEA114062293
GCA_958440145.1ContigCAUBYA000000000SAMEA114062233
GCA_958440015.1ContigCAUBXO000000000SAMEA114062189
GCA_958440005.1ContigCAUBXN000000000SAMEA114062203
GCA_958440035.1ContigCAUBXP000000000SAMEA114062184
GCA_958439975.1ContigCAUBXL000000000SAMEA114062143
GCA_958447065.1ContigCAUCYR000000000SAMEA114062239
GCA_958447145.1ContigCAUCYZ000000000SAMEA114062232
GCA_958447185.1ContigCAUCZA000000000SAMEA114062290
GCA_958447105.1ContigCAUCYX000000000SAMEA114062139
GCA_958447275.1ContigCAUCZL000000000SAMEA114062321
GCA_958447405.1ContigCAUCZX000000000SAMEA114062382
GCA_958447385.1ContigCAUCZZ000000000SAMEA114062341
GCA_958447365.1ContigCAUCZV000000000SAMEA114062338
GCA_958447245.1ContigCAUCZJ000000000SAMEA114062301
GCA_958447335.1ContigCAUCZU000000000SAMEA114062331
GCA_958447305.1ContigCAUCZQ000000000SAMEA114062350
GCA_958448605.1ContigCAUDEO000000000SAMEA114062022
GCA_958448485.1ContigCAUDDY000000000SAMEA114062023
GCA_958447435.1ContigCAUDAD000000000SAMEA114062391
GCA_958447465.1ContigCAUDAC000000000SAMEA114062420
GCA_958352655.1ContigCATWPK000000000SAMEA114062106
GCA_958352635.1ContigCATWPJ000000000SAMEA114062020
GCA_958441755.1ContigCAUCED000000000SAMEA114062114
GCA_958441795.1ContigCAUCEK000000000SAMEA114062110
GCA_958439855.1ContigCAUBXE000000000SAMEA114062112
GCA_958440415.1ContigCAUBZA000000000SAMEA114062411
GCA_958443465.1ContigCAUCKV000000000SAMEA114062218
GCA_958443795.1ContigCAUCMD000000000SAMEA114062261
GCA_958447555.1ContigCAUDAO000000000SAMEA114062425
GCA_958445485.1ContigCAUCST000000000SAMEA114062034
GCA_958442695.1ContigCAUCHV000000000SAMEA114062337
GCA_958445395.1ContigCAUCSA000000000SAMEA114062036
GCA_958449105.1ContigCAUDGM000000000SAMEA114062053
GCA_958447345.1ContigCAUCZS000000000SAMEA114062332
GCA_958447395.1ContigCAUCZY000000000SAMEA114062342
GCA_958440165.1ContigCAUBYD000000000SAMEA114062311
GCA_958442115.1ContigCAUCFO000000000SAMEA114062220
GCA_958441645.1ContigCAUCDY000000000SAMEA114062075
GCA_958440335.1ContigCAUBYS000000000SAMEA114062328
GCA_958353885.1ContigCATWUE000000000SAMEA114062185
GCA_958443565.1ContigCAUCLG000000000SAMEA114062392
GCA_958441765.1ContigCAUCEH000000000SAMEA114062132
GCA_958441965.1ContigCAUCEZ000000000SAMEA114062137
GCA_958350575.1ContigCATWHM000000000SAMEA114062145
GCA_958442355.1ContigCAUCGM000000000SAMEA114062327
GCA_958449475.1ContigCAUDHW000000000SAMEA114062076
GCA_958447085.1ContigCAUCYS000000000SAMEA114062230
GCA_958353785.1ContigCATWTU000000000SAMEA114062428
GCA_958352055.1ContigCATWNE000000000SAMEA114062204
GCA_958350775.1ContigCATWII000000000SAMEA114062067
GCA_958439955.1ContigCAUBXH000000000SAMEA114062175
GCA_958447485.1ContigCAUDAI000000000SAMEA114062404
GCA_958443765.1ContigCAUCMA000000000SAMEA114062316
GCA_958440255.1ContigCAUBYM000000000SAMEA114062273
GCA_958442205.1ContigCAUCGA000000000SAMEA114062237
GCA_958441105.1ContigCAUCBT000000000SAMEA114062062
GCA_958442295.1ContigCAUCGE000000000SAMEA114062276
GCA_958442345.1ContigCAUCGL000000000SAMEA114062346
GCA_958442415.1ContigCAUCGX000000000SAMEA114062326
GCA_958445585.1ContigCAUCSZ000000000SAMEA114062024
GCA_958445565.1ContigCAUCSX000000000SAMEA114062039
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