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Genome Information for Pelecanus crispus
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The Dalmatian pelican (Pelecanus crispus) is the largest member of the pelican family, and one of the world's largest freshwater birds, with wingspans rivaling those of the great albatrosses. Their range spans much of Central Eurasia, from the Mediterranean in the West to the Taiwan Strait in the East, and from the Persian Gulf in the South to Siberia in the North (modified from Wikipedia entry). This sample from a female in the Copenhagen Zoo, in Denmark, was procured by Mads Bertelsen, and coordinated by Tom Gilbert and Erich Jarvis to be used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis, with funding support from Gilbert and Jarvis.
Accession | PRJNA986544 |
Type | Umbrella project |
Organism | Pelecanus crispus[Taxonomy ID: 36300] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus; Pelecanus crispus |
Submission | Registration date: 22-Jun-2023 Vertebrate Genomes Project |
Relevance | Reference genome |
Project Data:
Resource Name | Number of Links |
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Sequence data |
Nucleotide (total) | 37 |
WGS master | 2 |
SRA Experiments | 9 |
Publications |
PubMed | 1 |
PMC | 1 |
Other datasets |
BioSample | 2 |
Assembly | 2 |
This project encompasses the following 3 sub-projects:
Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs SRA or Trace Total | 1 1 1 3
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BioProject accession | Assembly level | Name | Title |
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PRJNA984931 | Chromosomes | Pelecanus crispus | Pelecanus crispus (Dalmatian pelican) reference genome, bPelCri1, primary haplotype (Vertebrate Genomes Project) | PRJNA984932 | Contigs | Pelecanus crispus | Pelecanus crispus (Dalmatian pelican) reference genome, bPelCri1, alternate haplotype (Vertebrate Genomes Project) | PRJNA1008660 | SRA or Trace | Pelecanus crispus (Dalmatian pelican) reference genome, bPelCri1, sequence data | Pelecanus crispus (Dalmatian pelican) reference genome, bPelCri1, sequence data (G10K) |
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