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Accession: PRJNA991498 ID: 991498

Species isolated from Metal Working Fluids Genome sequencing and assembly

Sequencing and assembly of bacterial species isolated from metal working fluids

Accession	PRJNA991498
Data Type	Genome sequencing
Scope	Multispecies
Publications (total 3) Less...	More... Published online: Piccardi P et al., "Toxicity drives facilitation between 4 bacterial species", Proceedings of the National Academy of Sciences, 2019;116(32):15979-15984 Published online: Piccardi P et al., "Microbial invasion of a toxic medium is facilitated by a resident community but inhibited as the community co-evolves", The ISME Journal, 2022;16(12):2644-2652 Published online: Dos Santos A et al., "Classifying Interactions in a Synthetic Bacterial Community Is Hindered by Inhibitory Growth Medium", mSystems, 2022;7(5) Less...
Grants	"Ambizione grant PZ00P3_154736" (Grant ID PZ00P3_154736, Swiss National Science Foundation) "ERC Starting Grant 715097" (Grant ID 715097, European Research Council)
Submission	Registration date: 5-Jul-2023 University of Lausanne
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	19
WGS master	5
Genomic DNA	14
SRA Experiments	136
Protein Sequences	35345
Other datasets
BioSample	149
Assembly	13

Assembly details:

Assembly level

Number of Assemblies

Complete genome

Complete genome

Contig

8
5
13

Assembly	Level	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_041075265.1			1	SAMN42447754	103	Aeromonas caviae
GCA_040790085.1		JBFMXB000000000		SAMN42447759	122	Agrobacterium fabrum
GCA_040790065.1		JBFMXC000000000		SAMN42447760	122	Agrobacterium fabrum
GCA_030505215.1			5	SAMN36295308	MWF001	Agrobacterium tumefaciens
GCA_041075215.1			1	SAMN42447753	101	Alcaligenes nematophilus
GCA_030518775.1			2	SAMN36295337	MWF001	Brucella anthropi
GCA_030505195.1			2	SAMN36295335	MWF001	Comamonas testosteroni
GCA_040790455.1		JBFMWZ000000000		SAMN42447755	108	Enterococcus avium
GCA_041075275.1			1	SAMN42447756	109	Klebsiella quasipneumoniae
GCA_030518755.1			1	SAMN36295336	MWF001	Microbacterium maritypicum
GCA_041075285.1			1	SAMN42447758	119	Providencia rettgeri
GCA_040790125.1		JBFMXA000000000		SAMN42447757	114	Pseudomonas fulva
GCA_040790105.1		JBFMXD000000000		SAMN42447752	1w	Staphylococcus warneri

SRA Data Details

Parameter	Value
Data volume, Gbases	1,118
Data volume, Tbytes	0.35

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Genomic DNA
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Protein
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SRA
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WGS master
Link to WGS master record(s)

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