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Items: 1 to 20 of 76

1.

Human gammaherpesvirus 4

Genome sequencing of Epstein-Barr virus in diseases including gastric cancer

Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Genome sequencing
Scope:
Monoisolate
Department of Virology, Nagoya City University Graduate School of Medical Sciences
Accession:
PRJDB14197
ID:
1077483
2.

Geographic variation in EBV genomes predicts variable susceptibility to immune therapy

Project data type: Raw sequence reads
Scope:
Multispecies
Fred Hutchinson Cancer Center
Accession:
PRJNA1063319
ID:
1063319
3.

A distinct isoform of lymphoid enhancer binding factor 1 (LEF1) epigenetically restricts EBV reactivation to maintain viral latency

Organism:
Human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Epigenomics
Scope:
Multiisolate
Microbiology and Immunology, Louisiana State University Health Sciences Center-Shreveport
Accession:
PRJNA1028955
ID:
1028955
4.

The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [HiC]

Organism:
Human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Other
Scope:
Multiisolate
The Wistar Institute
Accession:
PRJNA1001888
ID:
1001888
5.

The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [ChIP-seq]

Organism:
Human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Epigenomics
Scope:
Multiisolate
The Wistar Institute
Accession:
PRJNA1001873
ID:
1001873
6.

Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer [RNA]

Organism:
Human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Genomics, Bioinformatics, The Wistar Institute
Accession:
PRJNA1000938
ID:
1000938
7.

Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer [ATAC]

Organism:
Human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Epigenomics
Scope:
Multiisolate
Genomics, Bioinformatics, The Wistar Institute
Accession:
PRJNA1000476
ID:
1000476
8.

Next-generation sequencing (NGS) analysis of BALF specimens

Project data type: Raw sequence reads
Scope:
Multispecies
The First Affiliated Hospital of Ningbo University
Accession:
PRJNA984249
ID:
984249
9.
10.
11.

Epstein-Barr virus pan-genome reference by long-read sequencing and de novo genome assembling analysis

Project data type: Genome sequencing
Scope:
Multispecies
Genome Institute of Singapore
Accession:
PRJNA951909
ID:
951909
12.

Metagenomics-M37

Project data type: Raw sequence reads
Scope:
Multispecies
Oxford University Clinical Research Unit
Accession:
PRJNA935919
ID:
935919
13.

Unstable EBV latency drives inflammation in multiple sclerosis patient derived spontaneous B cells [EBV WGS]

Organism:
human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Other
Scope:
Multiisolate
Genomics, Bioinformatics, The Wistar Institute
Accession:
PRJNA915206
ID:
915206
14.

EBV BALF2 Genotyping from Human Plasma

Project data type: Raw sequence reads
Scope:
Multispecies
Stanford University
Accession:
PRJNA848410
ID:
848410
15.

ASPIRE

Accurate reconstruction of viral genomes in human cells from short reads only using iterative refinement

Project data type: Other
Scope:
Monoisolate
THE CHINESE UNIVERSITY OF HONG KONG
Accession:
PRJEB42525
ID:
840081
16.

Human gammaherpesvirus 4

Comprehensive genetic analysis of non-endemic nasopharyngeal carcinoma

Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Genome sequencing
Scope:
Monoisolate
Medical Genomics Center, Nagoya University Hospital
Accession:
PRJDB12039
ID:
830766
17.

O.MIMAG

NGS in HSCT

Project data type: Genome sequencing and assembly
Scope:
Environment
Huazhong University of Science and Technology
Accession:
PRJNA820385
ID:
820385
18.

The Nuclear Lamina Binds the EBV Genome During Latency and Regulates Viral Gene Expression

Organism:
Human gammaherpesvirus 4
Taxonomy:
human gammaherpesvirus 4 (Epstein-Barr virus)
Project data type: Epigenomics
Scope:
Multiisolate
3rd Floor, Bioinformatics, Coriell Institute
Accession:
PRJNA817564
ID:
817564
19.

Lymphocryptovirus sp.

Cynomolgus Lymphocryptovirus Isolate from a Macaque with Post-transplant Lymphoproliferative Disorder

Taxonomy:
Lymphocryptovirus sp.
Project data type: Genome sequencing
Scope:
Monoisolate
Oregon Health & Science University
Accession:
PRJNA809704
ID:
809704
20.

Genome-wide profiling of Epstein-Barr virus integration by targeted sequencing in Epstein-Barr virus associated malignancies

Project data type: Raw sequence reads
Scope:
Multispecies
Sun Yat-sen University Cancer Center
Accession:
PRJNA786275
ID:
786275

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