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Accession: PRJNA902967 ID: 902967

Shot gun sequencing of genomes of Iberian freshwater fish species

We produced a reference database of whole genome sequences of freshwater fish species from Portuguese rivers. More...
AccessionPRJNA902967
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 18-Nov-2022
Faculty of Sciences from the University of Lisbon
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)35
SRA Experiments36
Other datasets
BioSample36
Assembly35
Assembly details:
Assembly levelNumber of Assemblies
35
35
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_029874615.1ScaffoldJAPMOK000000000SAMN31781915
ENV1425
GCA_029874405.1ScaffoldJAPMOI000000000SAMN31781917
ENV1444
GCA_029874995.1ScaffoldJAPMNU000000000SAMN31781932
AalburnusT0-10
GCA_029875135.1ScaffoldJAPMOH000000000SAMN31781919
AFAL1-T10
GCA_029874935.1ScaffoldJAPMNP000000000SAMN31781937
ABoyeriT8-24
GCA_030220045.1ScaffoldJASGAU000000000SAMN34074043
AqLg6
GCA_030220025.1ScaffoldJASGAT000000000SAMN34074046
JL_230314
GCA_029874265.1ScaffoldJAPMNY000000000SAMN31781928
CLAB
GCA_029874045.1ScaffoldJAPMNQ000000000SAMN31781936
1908
GCA_029582295.1ScaffoldJAPPTR000000000SAMN31781909
ENV1919
GCA_029874735.1ScaffoldJAPMOP000000000SAMN31781910
2013-PT
GCA_029874695.1ScaffoldJAPMON000000000SAMN31781912
ENV1256
GCA_029874575.1ScaffoldJAPMOL000000000SAMN31781914
ENV0576
GCA_029874555.1ScaffoldJAPMOJ000000000SAMN31781916
Ilu16-Mug10
GCA_029874285.1ScaffoldJAPMNX000000000SAMN31781929
ENV1577
GCA_029874635.1ScaffoldJAPMOM000000000SAMN31781913
Aur19-OL-20
GCA_030220065.1ScaffoldJASFWZ000000000SAMN34074044
9505
GCA_029582275.1ScaffoldJAPPTQ000000000SAMN31781918
Plan19-long9
GCA_029875015.1ScaffoldJAPMOB000000000SAMN31781925
LGib1-T2-1801
GCA_029874325.1ScaffoldJAPMNT000000000SAMN31781933
1901
GCA_029874815.1ScaffoldJAPMOO000000000SAMN31781911
HG1325
GCA_029874245.1ScaffoldJAPMNW000000000SAMN31781930
Mcef2-ENV1803
GCA_029874595.1ScaffoldJAPMNN000000000SAMN31781939
PM1973
GCA_029874915.1ScaffoldJAPMNV000000000SAMN31781931
ENV1825
GCA_029875035.1ScaffoldJAPMNZ000000000SAMN31781927
Pmic-T10-1895
GCA_029874365.1ScaffoldJAPMOF000000000SAMN31781921
ENV1931
GCA_029875115.1ScaffoldJAPMOE000000000SAMN31781922
FRISK0008
GCA_029874975.1ScaffoldJAPMOA000000000SAMN31781926
ENV1024
GCA_029874215.1ScaffoldJAPMNS000000000SAMN31781934
1942
GCA_029875075.1ScaffoldJAPMOD000000000SAMN31781923
ENV0013
GCA_029875055.1ScaffoldJAPMOC000000000SAMN31781924
FRISK0478
GCA_029874105.1ScaffoldJAPMNO000000000SAMN31781938
SC133GL
GCA_029874195.1ScaffoldJAPMNR000000000SAMN31781935
553
GCA_029875095.1ScaffoldJAPMOG000000000SAMN31781920
SCEF-FRISK3481
GCA_030220085.1ScaffoldJASFWY000000000SAMN34074045
CAVE-DANIO4
SRA Data Details
ParameterValue
Data volume, Gbases1,288
Data volume, Tbytes0.44

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