ID 682646 - BioProject

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Accession: PRJNA682646 ID: 682646

Interactions between strains govern the eco-evolutionary dynamics of microbial communities

Assembled genomes from 33 bacterial isolates from pitcher plant-derived bacterial communities that were enriched and propagated in the lab

Accession	PRJNA682646
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Simons Collaboration: Principles of Microbial Ecosystems (PriME)" (Grant ID 542395, Simons Foundation) "James S. McDonnell Foundation Postdoctoral Fellowship" (Grant ID 220020477, James S. McDonnell Foundation) "Human Frontiers Science Program Fellowship" (Grant ID LT000643/2016-L, Human Frontiers Science Program) "Physics of Living Systems Fellowship" (Grant ID GBMF4513, Gordon and Betty Moore Foundation)
Submission	Registration date: 4-Dec-2020 Massachusetts Institute of Technology
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	33
SRA Experiments	1
Other datasets
BioSample	34
Assembly	33

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

33
33

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_016428805.1	JAELTJ000000000	SAMN17004942	ASV32	Achromobacter sp. ASV32
GCA_016429305.1	JAELUK000000000	SAMN17004915	ASV4	Achromobacter sp. ASV4
GCA_016429385.1	JAELUN000000000	SAMN17004912	ASV1	Aquitalea sp. ASV1
GCA_016429185.1	JAELUD000000000	SAMN17004922	ASV11	Aquitalea sp. ASV11
GCA_016429115.1	JAELTZ000000000	SAMN17004926	ASV15	Aquitalea sp. ASV15
GCA_016429085.1	JAELTY000000000	SAMN17004927	ASV16	Aquitalea sp. ASV16
GCA_016428755.1	JAELTI000000000	SAMN17004943	ASV33	Bosea sp. ASV33
GCA_016429195.1	JAELUF000000000	SAMN17004920	ASV9	Brevundimonas sp. ASV9
GCA_016429345.1	JAELUL000000000	SAMN17004914	ASV3	Chitinophaga sp. ASV3
GCA_016428945.1	JAELTR000000000	SAMN17004934	ASV23	Chromobacterium sp. ASV23
GCA_016429325.1	JAELUJ000000000	SAMN17004916	ASV5	Chromobacterium sp. ASV5
GCA_016428845.1	JAELTM000000000	SAMN17004939	ASV29	Citrobacter sp. ASV29
GCA_016429245.1	JAELUE000000000	SAMN17004921	ASV10	Comamonas sp. ASV10
GCA_016428765.1	JAELTK000000000	SAMN17004941	ASV31	Delftia sp. ASV31
GCA_016428975.1	JAELTT000000000	SAMN17004932	ASV21	Dyella sp. ASV21
GCA_016428905.1	JAELTQ000000000	SAMN17004935	ASV24	Dyella sp. ASV24
GCA_016428745.1	JAELTH000000000	SAMN17004944	ASV34	Elizabethkingia sp. ASV34
GCA_016429105.1	JAELUB000000000	SAMN17004924	ASV13	Flavobacterium sp. ASV13
GCA_016429215.1	JAELUH000000000	SAMN17004918	ASV7	Herbaspirillum sp. ASV7
GCA_016428915.1	JAELTP000000000	SAMN17004936	ASV26	Pandoraea sp. ASV26
GCA_016428955.1	JAELTS000000000	SAMN17004933	ASV22	Paraburkholderia sp. ASV22
GCA_016429155.1	JAELUC000000000	SAMN17004923	ASV12	Pedobacter sp. ASV12
GCA_016429065.1	JAELTX000000000	SAMN17004928	ASV17	Pedobacter sp. ASV17
GCA_016429005.1	JAELTV000000000	SAMN17004930	ASV19	Pedobacter sp. ASV19
GCA_016429355.1	JAELUM000000000	SAMN17004913	ASV2	Pedobacter sp. ASV2
GCA_016428855.1	JAELTN000000000	SAMN17004938	ASV28	Pedobacter sp. ASV28
GCA_016429135.1	JAELUA000000000	SAMN17004925	ASV14	Pseudomonas sp. ASV14
GCA_016429285.1	JAELUI000000000	SAMN17004917	ASV6	Ralstonia sp. ASV6
GCA_016429015.1	JAELTU000000000	SAMN17004931	ASV20	Rhizobium sp. ASV20
GCA_016429255.1	JAELUG000000000	SAMN17004919	ASV8	Rhizobium sp. ASV8
GCA_016428815.1	JAELTL000000000	SAMN17004940	ASV30	Serratia sp. ASV30
GCA_016429035.1	JAELTW000000000	SAMN17004929	ASV18	Sphingomonas sp. ASV18
GCA_016428875.1	JAELTO000000000	SAMN17004937	ASV27	Xylophilus sp. ASV27

SRA Data Details

Parameter	Value
Data volume, Gbases	4
Data volume, Mbytes	2166

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Interactions between strains govern the eco-evolutionary dynamics of microbial communities

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