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Accession: PRJNA681736 ID: 681736

Podaxis

Whole-genome sequencing of the fungal genus Podaxis Genome sequencing and assembly

Comparative genomic analysis of different species within the basidiomycete fungal genus Podaxis.

Accession	PRJNA681736
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Conlon B et al., "Genome reduction and relaxed selection is associated with the transition to symbiosis in the basidiomycete genus Podaxis", iScience, 2021;24(6)
Grants	"Solutions to Extreme Life in a Global Fungus" (Grant ID DFF - 7014-00178, The Independent Research Fund Denmark)
Submission	Registration date: 1-Dec-2020 University of Copenhagen
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	10
SRA Experiments	13
Other datasets
BioSample	10
Assembly	10

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

7
3
10

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_018524395.1		JAEUWJ000000000	SAMN17013569	LINN1287.8	Podaxis carcinomalis
GCA_018524465.1		JAEUWN000000000	SAMN17013565	LINN1287.7	Podaxis pistillaris
GCA_018524415.1		JAEUWL000000000	SAMN17013567	PREM57485	Podaxis rugospora
GCA_018524725.1		JAEUWP000000000	SAMN17013563	AQ645840	Podaxis sp. AQ645840
GCA_018524425.1		JAEUWK000000000	SAMN17013568	AQ795752	Podaxis sp. AQ795752
GCA_018524765.1		JAEUWQ000000000	SAMN17013562	AQ799166	Podaxis sp. AQ799166
GCA_018524895.1		JAEUWR000000000	SAMN17013561	C-F-101400	Podaxis sp. C-F-101400
GCA_018524435.1		JAEUWM000000000	SAMN17013566	C-F-101401	Podaxis sp. C-F-101401
GCA_018524945.1		JAEUWS000000000	SAMN17013560	C-F-92630	Podaxis sp. C-F-92630
GCA_018524685.1		JAEUWO000000000	SAMN17013564	MADm22	Podaxis sp. MADm22

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	24956

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Nucleotide
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SRA
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WGS master
Link to WGS master record(s)

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Podaxis
Whole-genome sequencing of the fungal genus Podaxis Genome sequencing and assembly

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