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Accession: PRJNA857095 ID: 857095

Genomic view of archaeal and bacterial diversity in skeleton of coral Porites lutea and Isopora palifera

We present a genome-centric view of the skeleton of the reef-building corals' Porites lutea and Isopora palifera, through a compendium of ~400 high-quality bacterial and archaeal metagenome-assembled genomes (MAGs), spanning 34 phyla and 57 microbial classes.
AccessionPRJNA857095
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsTandon K et al., "Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera.", Gigascience, 2022 Dec 28;12
SubmissionRegistration date: 8-Jul-2022
The University of Melbourne
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)393
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample427
Assembly393
Assembly details:
Assembly levelNumber of Assemblies
392
392
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_028285745.1ContigJANQOP000000000SAMN29486709
IP29b_bin.137
GCA_028285565.1ContigJANQOY000000000SAMN29486718
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GCA_028285315.1ContigJANQPU000000000SAMN29486740
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GCA_028285585.1ContigJANQOU000000000SAMN29486714
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GCA_028284765.1ContigJANQRA000000000SAMN29486772
IP29b_bin.45
GCA_028277865.1ContigJANQFM000000000SAMN29486472
PL23a_bin.88
GCA_028282065.1ContigJANQIR000000000SAMN29486555
PL24a_bin.60
GCA_028281235.1ContigJANQKG000000000SAMN29486596
PL25a_bin.15
GCA_028284625.1ContigJANQRH000000000SAMN29486779
IP29b_bin.53
GCA_028280385.1ContigJANQLX000000000SAMN29486639
PL25a_bin.75
GCA_028282265.1ContigJANQIH000000000SAMN29486545
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GCA_028284725.1ContigJANQRD000000000SAMN29486775
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GCA_028289725.1ContigJANQOH000000000SAMN29486701
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GCA_028277515.1ContigJANQGC000000000SAMN29486488
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GCA_028284105.1ContigJANQSK000000000SAMN29486808
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GCA_028285185.1ContigJANQQD000000000SAMN29486749
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GCA_028278545.1ContigJANQED000000000SAMN29486437
PL23a_bin.114
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GCA_028278305.1ContigJANQEP000000000SAMN29486449
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GCA_028279865.1ContigJANQMV000000000SAMN29486663
PL25b_bin.48
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PL23b_bin.56
GCA_028284775.1ContigJANQRB000000000SAMN29486773
IP29b_bin.46
GCA_028279045.1ContigJANQSZ000000000SAMN29486823
IP29b_bin.165
GCA_028279765.1ContigJANQND000000000SAMN29486671
PL25a_bin.96
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PL23a_bin.96
GCA_028279725.1ContigJANQNE000000000SAMN29486672
PL23a_bin.30
GCA_028279685.1ContigJANQNG000000000SAMN29486674
PL23a_bin.67
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PL23a_bin.24
GCA_028280285.1ContigJANQMA000000000SAMN29486642
PL25a_bin.80
GCA_028280145.1ContigJANQMM000000000SAMN29486654
PL25b_bin.16
GCA_028279995.1ContigJANQMQ000000000SAMN29486658
PL25b_bin.27
GCA_028284075.1ContigJANQSL000000000SAMN29486809
IP29b_bin.95
GCA_028279645.1ContigJANQNJ000000000SAMN29486677
PL23a_bin.42
GCA_028279595.1ContigJANQNK000000000SAMN29486678
PL23a_bin.111
GCA_028279585.1ContigJANQNL000000000SAMN29486679
PL23a_bin.128
GCA_028289805.1ContigJANQNI000000000SAMN29486676
PL25a_bin.104
GCA_028289585.1ContigJANQPI000000000SAMN29486728
IP29b_bin.158
GCA_028281575.1ContigJANQJP000000000SAMN29486579
PL25a_bin.119
GCA_028278335.1ContigJANQEN000000000SAMN29486447
PL23a_bin.29
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PL23a_bin.6
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PL24a_bin.35
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PL25b_bin.21
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PL25a_bin.4
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PL25a_bin.143
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PL23b_bin.32
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PL24a_bin.50
GCA_028277445.1ContigJANQGG000000000SAMN29486492
PL23b_bin.36
GCA_028281125.1ContigJANQKM000000000SAMN29486602
PL25a_bin.157
GCA_028277905.1ContigJANQFI000000000SAMN29486468
PL23a_bin.8
GCA_028277465.1ContigJANQGF000000000SAMN29486491
PL23b_bin.34
GCA_028278145.1ContigJANQEV000000000SAMN29486455
PL23a_bin.5
GCA_028280505.1ContigJANQLO000000000SAMN29486630
PL25a_bin.61
GCA_028284585.1ContigJANQRK000000000SAMN29486782
IP29b_bin.61
GCA_028280575.1ContigJANQLN000000000SAMN29486629
PL25a_bin.60
GCA_028278115.1ContigJANQEZ000000000SAMN29486459
PL23a_bin.55
GCA_028280005.1ContigJANQMP000000000SAMN29486657
PL25b_bin.25
GCA_028279945.1ContigJANQMT000000000SAMN29486661
PL25b_bin.38
GCA_028281795.1ContigJANQJE000000000SAMN29486568
PL25a_bin.105
GCA_028284665.1ContigJANQRG000000000SAMN29486778
IP29b_bin.52
GCA_028284935.1ContigJANQQQ000000000SAMN29486762
IP29b_bin.31
GCA_028284285.1ContigJANQSA000000000SAMN29486798
IP29b_bin.83
GCA_028281025.1ContigJANQKR000000000SAMN29486607
PL25a_bin.19
GCA_028289505.1ContigJANQPK000000000SAMN29486730
IP29b_bin.161
GCA_028285685.1ContigJANQOR000000000SAMN29486711
IP29b_bin.14
GCA_028285445.1ContigJANQPQ000000000SAMN29486736
IP29b_bin.169
GCA_028284125.1ContigJANQSI000000000SAMN29486806
IP29b_bin.92
GCA_028281285.1ContigJANQKF000000000SAMN29486595
PL25a_bin.147
GCA_028279155.1ContigJANQST000000000SAMN29486817
IP30a_bin.7
GCA_028278225.1ContigJANQEU000000000SAMN29486454
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PL23a_bin.113
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IP31a_bin.1
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GCA_028277765.1ContigJANQFQ000000000SAMN29486476
PL23a_bin.99
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PL25b_bin.1
GCA_028278255.1ContigJANQER000000000SAMN29486451
PL23a_bin.39
GCA_028281625.1ContigJANQJN000000000SAMN29486577
PL25a_bin.117
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IP29b_bin.47
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IP30a_bin.12
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PL23b_bin.95
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PL25a_bin.84
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PL25a_bin.101
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PL24a_bin.40
GCA_028289755.1ContigJANQOG000000000SAMN29486700
IP29b_bin.127
GCA_028280565.1ContigJANQLQ000000000SAMN29486632
PL25a_bin.63
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PL23b_bin.14
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PL25a_bin.135
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IP29b_bin.112
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IP29b_bin.12
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IP29b_bin.141
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PL25a_bin.89
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PL24a_bin.41
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PL25a_bin.6
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PL24a_bin.58
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PL23b_bin.40
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PL25a_bin.141
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PL24a_bin.65
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IP29b_bin.21
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IP29b_bin.146
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PL23b_bin.39
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PL25a_bin.62
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IP29b_bin.120
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IP29b_bin.189
GCA_028284185.1ContigJANQSG000000000SAMN29486804
IP29b_bin.90
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PL25a_bin.68
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PL25a_bin.64
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PL23a_bin.115
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IP29b_bin.147
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IP29b_bin.29
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IP29b_bin.86
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IP29b_bin.68
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IP29b_bin.34
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PL23a_bin.25
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PL23a_bin.40
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PL23a_bin.57
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PL23a_bin.83
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PL23a_bin.18
GCA_028279625.1ContigJANQNM000000000SAMN29486680
PL23a_bin.61
GCA_028278985.1ContigJANQTA000000000SAMN29486824
IP29b_bin.65
GCA_028278405.1ContigJANQEK000000000SAMN29486444
PL23a_bin.2
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PL25a_bin.92
GCA_028282865.1ContigJANQHA000000000SAMN29486512
PL23b_bin.73
GCA_028277945.1ContigJANQFH000000000SAMN29486467
PL23a_bin.77
GCA_028280955.1ContigJANQKU000000000SAMN29486610
PL25a_bin.27
GCA_028280945.1ContigJANQKV000000000SAMN29486611
PL25a_bin.28
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PL25a_bin.151
GCA_028284385.1ContigJANQRT000000000SAMN29486791
IP29b_bin.74
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IP29b_bin.87
GCA_028280845.1ContigJANQKZ000000000SAMN29486615
PL25a_bin.31
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IP29b_bin.152
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PL23b_bin.99
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IP29b_bin.50
GCA_028284605.1ContigJANQRL000000000SAMN29486783
IP29b_bin.62
GCA_028285485.1ContigJANQPC000000000SAMN29486722
IP29b_bin.151
GCA_028279465.1ContigJANQNS000000000SAMN29486686
IP29b_bin.104
GCA_028289565.1ContigJANQPE000000000SAMN29486724
IP29b_bin.154
GCA_028284065.1ContigJANQSJ000000000SAMN29486807
IP29b_bin.93
GCA_028280115.1ContigJANQMJ000000000SAMN29486651
PL25a_bin.97
GCA_028277565.1ContigJANQGA000000000SAMN29486486
PL23b_bin.25
GCA_028280305.1ContigJANQMC000000000SAMN29486644
PL25a_bin.83
GCA_028281305.1ContigJANQKD000000000SAMN29486593
PL25a_bin.145
GCA_028289705.1ContigJANQOI000000000SAMN29486702
IP29b_bin.129
GCA_028284635.1ContigJANQRJ000000000SAMN29486781
IP29b_bin.57
GCA_028285385.1ContigJANQPR000000000SAMN29486737
IP29b_bin.17
GCA_028284925.1ContigJANQQT000000000SAMN29486765
IP29b_bin.36
GCA_028284155.1ContigJANQSF000000000SAMN29486803
IP29b_bin.9
GCA_028282805.1ContigJANQHD000000000SAMN29486515
PL23b_bin.82
GCA_028282685.1ContigJANQHK000000000SAMN29486522
PL23b_bin.93
GCA_028281215.1ContigJANQKH000000000SAMN29486597
PL25a_bin.150
GCA_028281485.1ContigJANQJT000000000SAMN29486583
PL25a_bin.124
GCA_028280965.1ContigJANQKT000000000SAMN29486609
PL25a_bin.26
GCA_028277745.1ContigJANQFR000000000SAMN29486477
PL23b_bin.10
GCA_028277685.1ContigJANQFT000000000SAMN29486479
PL23b_bin.16
GCA_028277645.1ContigJANQFV000000000SAMN29486481
PL23b_bin.19
GCA_028277545.1ContigJANQGB000000000SAMN29486487
PL23b_bin.28
GCA_028279405.1ContigJANQNU000000000SAMN29486688
IP29b_bin.106
GCA_028282665.1ContigJANQHN000000000SAMN29486525
PL23b_bin.97
GCA_028285035.1ContigJANQQF000000000SAMN29486751
IP29b_bin.191
GCA_028289375.1ContigJANQQK000000000SAMN29486756
IP29b_bin.25
GCA_028289195.1ContigJANQQR000000000SAMN29486763
IP29b_bin.33
GCA_028285065.1ContigJANQQG000000000SAMN29486752
IP29b_bin.20
GCA_028284805.1ContigJANQQZ000000000SAMN29486771
IP29b_bin.42
GCA_028279375.1ContigJANQNW000000000SAMN29486690
IP29b_bin.111
GCA_028278245.1ContigJANQEQ000000000SAMN29486450
PL23a_bin.37
GCA_028280445.1ContigJANQLU000000000SAMN29486636
PL25a_bin.70
GCA_028281725.1ContigJANQJJ000000000SAMN29486573
PL25a_bin.111
GCA_028289675.1ContigJANQOL000000000SAMN29486705
IP29b_bin.132
GCA_028289405.1ContigJANQPP000000000SAMN29486735
IP29b_bin.168
GCA_028289525.1ContigJANQPJ000000000SAMN29486729
IP29b_bin.16
GCA_028279215.1ContigJANQOF000000000SAMN29486699
IP29b_bin.126
GCA_028284885.1ContigJANQQW000000000SAMN29486768
IP29b_bin.4
GCA_028284145.1ContigJANQSH000000000SAMN29486805
IP29b_bin.91
GCA_028284485.1ContigJANQRQ000000000SAMN29486788
IP29b_bin.70
GCA_028285345.1ContigJANQPT000000000SAMN29486739
IP29b_bin.173
GCA_028289345.1ContigJANQQL000000000SAMN29486757
IP29b_bin.26
GCA_028278425.1ContigJANQEJ000000000SAMN29486443
PL23a_bin.129
GCA_028281765.1ContigJANQJF000000000SAMN29486569
PL25a_bin.106
GCA_028280485.1ContigJANQLS000000000SAMN29486634
PL25a_bin.67
GCA_028280785.1ContigJANQLF000000000SAMN29486621
PL25a_bin.47
GCA_028281445.1ContigJANQJW000000000SAMN29486586
PL25a_bin.13
GCA_028280905.1ContigJANQKW000000000SAMN29486612
PL25a_bin.29
GCA_028281945.1ContigJANQIW000000000SAMN29486560
PL24a_bin.78
GCA_028277505.1ContigJANQGD000000000SAMN29486489
PL23b_bin.31
GCA_028282705.1ContigJANQHI000000000SAMN29486520
PL23b_bin.91
GCA_028282195.1ContigJANQII000000000SAMN29486546
PL24a_bin.47
GCA_028281885.1ContigJANQJA000000000SAMN29486564
PL25a_bin.10
GCA_028281605.1ContigJANQJO000000000SAMN29486578
PL25a_bin.118
GCA_028281635.1ContigJANQJM000000000SAMN29486576
PL25a_bin.116
GCA_028281145.1ContigJANQKL000000000SAMN29486601
PL25a_bin.156
GCA_028281005.1ContigJANQKS000000000SAMN29486608
PL25a_bin.22
GCA_028280225.1ContigJANQMF000000000SAMN29486647
PL25a_bin.88
GCA_028280345.1ContigJANQLY000000000SAMN29486640
PL25a_bin.76
GCA_028280085.1ContigJANQMK000000000SAMN29486652
PL25a_bin.99
GCA_028278385.1ContigJANQEM000000000SAMN29486446
PL23a_bin.28
GCA_028277965.1ContigJANQFF000000000SAMN29486465
PL23a_bin.75
GCA_028279115.1ContigJANQSV000000000SAMN29486819
IP30b_bin.5
GCA_028279305.1ContigJANQOA000000000SAMN29486694
IP29b_bin.118
GCA_028285415.1ContigJANQPF000000000SAMN29486725
IP29b_bin.155
GCA_028282975.1ContigJANQGR000000000SAMN29486503
PL23b_bin.54
GCA_028285755.1ContigJANQOQ000000000SAMN29486710
IP29b_bin.139
GCA_028284415.1ContigJANQRU000000000SAMN29486792
IP29b_bin.76
GCA_028279875.1ContigJANQMU000000000SAMN29486662
PL25b_bin.41
GCA_028281105.1ContigJANQKQ000000000SAMN29486606
PL25a_bin.161
GCA_028285165.1ContigJANQQB000000000SAMN29486747
IP29b_bin.188
GCA_028278505.1ContigJANQEG000000000SAMN29486440
PL23a_bin.122
GCA_028279315.1ContigJANQNZ000000000SAMN29486693
IP29b_bin.114
GCA_028277295.1ContigJANQGN000000000SAMN29486499
PL23b_bin.47
GCA_028277795.1ContigJANQFP000000000SAMN29486475
PL23a_bin.98
GCA_028278135.1ContigJANQEW000000000SAMN29486456
PL23a_bin.50
GCA_028281845.1ContigJANQJD000000000SAMN29486567
PL25a_bin.102
GCA_028281785.1ContigJANQJG000000000SAMN29486570
PL25a_bin.107
GCA_028282185.1ContigJANQIJ000000000SAMN29486547
PL24a_bin.49
GCA_028284865.1ContigJANQQV000000000SAMN29486767
IP29b_bin.39
GCA_028284545.1ContigJANQRN000000000SAMN29486785
IP29b_bin.67
GCA_028284265.1ContigJANQRZ000000000SAMN29486797
IP29b_bin.81
GCA_028283985.1ContigJANQSQ000000000SAMN29486814
IP30a_bin.15
GCA_028278205.1ContigJANQES000000000SAMN29486452
PL23a_bin.4
GCA_028279885.1ContigJANQMX000000000SAMN29486665
PL25b_bin.61
GCA_028279965.1ContigJANQMS000000000SAMN29486660
PL25b_bin.34
GCA_028285215.1ContigJANQPZ000000000SAMN29486745
IP29b_bin.183
GCA_028282405.1ContigJANQIA000000000SAMN29486538
PL24a_bin.31
GCA_028282755.1ContigJANQHH000000000SAMN29486519
PL23b_bin.90
GCA_028282625.1ContigJANQHP000000000SAMN29486527
PL24a_bin.1
GCA_028289305.1ContigJANQQO000000000SAMN29486760
IP29b_bin.3
GCA_028279475.1ContigJANQNR000000000SAMN29486685
IP29b_bin.103
GCA_028281385.1ContigJANQJY000000000SAMN29486588
PL25a_bin.132
GCA_028282505.1ContigJANQHV000000000SAMN29486533
PL24a_bin.25
GCA_028282825.1ContigJANQGZ000000000SAMN29486511
PL23b_bin.72
GCA_028282885.1ContigJANQGX000000000SAMN29486509
PL23b_bin.69
GCA_028281495.1ContigJANQJU000000000SAMN29486584
PL25a_bin.125
GCA_028280735.1ContigJANQLH000000000SAMN29486623
PL25a_bin.53
GCA_028289365.1ContigJANQQM000000000SAMN29486758
IP29b_bin.27
GCA_028285545.1ContigJANQPA000000000SAMN29486720
IP29b_bin.15
GCA_028282725.1ContigJANQHF000000000SAMN29486517
PL23b_bin.87
GCA_028285085.1ContigJANQQI000000000SAMN29486754
IP29b_bin.23
GCA_028284395.1ContigJANQRV000000000SAMN29486793
IP29b_bin.78
GCA_028280415.1ContigJANQLV000000000SAMN29486637
PL25a_bin.71
GCA_028277915.1ContigJANQFJ000000000SAMN29486469
PL23a_bin.82
GCA_028279185.1ContigJANQSS000000000SAMN29486816
IP30a_bin.4
GCA_028279105.1ContigJANQSW000000000SAMN29486820
IP30b_bin.6
GCA_028282745.1ContigJANQHJ000000000SAMN29486521
PL23b_bin.92
GCA_028282905.1ContigJANQGW000000000SAMN29486508
PL23b_bin.68
GCA_028281535.1ContigJANQJS000000000SAMN29486582
PL25a_bin.123
GCA_028277585.1ContigJANQFY000000000SAMN29486484
PL23b_bin.22
GCA_028281565.1ContigJANQJQ000000000SAMN29486580
PL25a_bin.121
GCA_028285285.1ContigJANQPW000000000SAMN29486742
IP29b_bin.18
GCA_028281425.1ContigJANQJX000000000SAMN29486587
PL25a_bin.130
GCA_028279205.1ContigJANQSR000000000SAMN29486815
IP30a_bin.2
GCA_028281675.1ContigJANQJL000000000SAMN29486575
PL25a_bin.114
GCA_028277845.1ContigJANQFL000000000SAMN29486471
PL23a_bin.86
GCA_028279555.1ContigJANQNO000000000SAMN29486682
IP29b_bin.10
GCA_028277165.1ContigJANQHC000000000SAMN29486514
PL23b_bin.8
GCA_028284845.1ContigJANQQY000000000SAMN29486770
IP29b_bin.41
GCA_028282545.1ContigJANQHT000000000SAMN29486531
PL24a_bin.20
GCA_028280715.1ContigJANQLG000000000SAMN29486622
PL25a_bin.51
GCA_028280705.1ContigJANQLE000000000SAMN29486620
PL25a_bin.43
GCA_028279445.1ContigJANQNT000000000SAMN29486687
IP29b_bin.105
GCA_028289445.1ContigJANQPO000000000SAMN29486734
IP29b_bin.167
GCA_028280885.1ContigJANQKY000000000SAMN29486614
PL25a_bin.30
GCA_028285365.1ContigJANQPS000000000SAMN29486738
IP29b_bin.170
GCA_028282145.1ContigJANQIN000000000SAMN29486551
PL24a_bin.57
GCA_028278025.1ContigJANQFE000000000SAMN29486464
PL23a_bin.71
GCA_028278625.1ContigJANQDY000000000SAMN29486432
PL23a_bin.10
GCA_028282925.1ContigJANQGV000000000SAMN29486507
PL23b_bin.63
GCA_028285405.1ContigJANQPH000000000SAMN29486727
IP29b_bin.157
GCA_028277725.1ContigJANQFX000000000SAMN29486483
PL23b_bin.21
GCA_028280805.1ContigJANQLB000000000SAMN29486617
PL25a_bin.35
GCA_028285715.1ContigJANQOO000000000SAMN29486708
IP29b_bin.135
GCA_028277605.1ContigJANQFZ000000000SAMN29486485
PL23b_bin.23
GCA_028280355.1ContigJANQMB000000000SAMN29486643
PL25a_bin.81
GCA_028281705.1ContigJANQJH000000000SAMN29486571
PL25a_bin.108
GCA_028289455.1ContigJANQPN000000000SAMN29486733
IP29b_bin.166
GCA_028289625.1ContigJANQOM000000000SAMN29486706
IP29b_bin.133
GCA_028282165.1ContigJANQIM000000000SAMN29486550
PL24a_bin.55
GCA_028280615.1ContigJANQLK000000000SAMN29486626
PL25a_bin.57
GCA_028279985.1ContigJANQMR000000000SAMN29486659
PL25b_bin.32
GCA_028279145.1ContigJANQSU000000000SAMN29486818
IP30b_bin.1
GCA_028277265.1ContigJANQGP000000000SAMN29486501
PL23b_bin.49
GCA_028277185.1ContigJANQGQ000000000SAMN29486502
PL23b_bin.52
GCA_028289545.1ContigJANQPG000000000SAMN29486726
IP29b_bin.156
GCA_028284825.1ContigJANQQX000000000SAMN29486769
IP29b_bin.40
GCA_028282095.1ContigJANQIP000000000SAMN29486553
PL24a_bin.59
GCA_028289465.1ContigJANQPM000000000SAMN29486732
IP29b_bin.163
GCA_028285525.1ContigJANQOZ000000000SAMN29486719
IP29b_bin.149
GCA_028279705.1ContigJANQNF000000000SAMN29486673
PL23a_bin.95
GCA_028279825.1ContigJANQNA000000000SAMN29486668
PL23a_bin.127
GCA_028279805.1ContigJANQMZ000000000SAMN29486667
PL23a_bin.47
GCA_028278455.1ContigJANQEH000000000SAMN29486441
PL23a_bin.125
GCA_028277985.1ContigJANQFG000000000SAMN29486466
PL23a_bin.76
GCA_028278125.1ContigJANQEY000000000SAMN29486458
PL23a_bin.54
GCA_028282845.1ContigJANQGY000000000SAMN29486510
PL23b_bin.70
SRA Data Details
ParameterValue
Data volume, Gbases1,008
Data volume, Tbytes0.63

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