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Items: 1 to 20 of 25

1.

In Vitro Genomic: XR-seq in vitro with E. Coli and Mammalian cell free extracts

Project data type: Raw sequence reads
Scope:
Multispecies
UNC Chapel Hill
Accession:
PRJNA1004315
ID:
1004315
2.

unidentified plasmid

A robust yeast biocontainment system with two-layered regulation switch dependent on unnatural amino acid

Taxonomy:
unidentified plasmid
Project data type: Other
Scope:
Synthetic
University of Chinese Academy of Sciences
Accession:
PRJNA988920
ID:
988920
3.

Machine vision guided robot for fully automated embryonic microinjection

Project data type: Raw sequence reads
Scope:
Multispecies
University of Minnesota
Accession:
PRJNA944637
ID:
944637
4.

Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation [Hoxb8-FL Brie sgRNA-Seq]

Project data type: Other
Scope:
Multispecies
NYU Langone
Accession:
PRJNA837860
ID:
837860
5.

satmut_utils: a simulation and variant calling package for multiplexed assays of variant effect

Project data type: Other
Scope:
Multispecies
Cenik, Molecular Biosciences, The University of Texas at Austin
Accession:
PRJNA828159
ID:
828159
6.

Nucleosome density shapes kilobase-scale regulation by a mammalian chromatin remodeler

Project data type: Other
Scope:
Multispecies
Ramani, Gladstone Institutes
Accession:
PRJNA813226
ID:
813226
7.

CAMI2 plasmids

Critical Assessment of Metagenome Interpretation plasmid raw sequencing data

Project data type: Other
Scope:
Monoisolate
HELMHOLTZ CENTER FOR INFECTION RESEARCH
Accession:
PRJEB50299
ID:
799579
8.

Rewiring of human neurodevelopmental gene regulatory programs by Human Accelerated Regions (HARs)

Project data type: Other
Scope:
Multispecies
Boston Children's Hospital
Accession:
PRJNA749292
ID:
749292
9.

Benchmarking of SpCas9 variants enables deeper base editor screens of BRCA1 and BCL2

Project data type: Other
Scope:
Multispecies
Genetic Perturbation Platform, Broad Institute
Accession:
PRJNA747943
ID:
747943
10.

CRISPR activation and interference screens decode stimulation responses in primary human T cells [CRISPR]

Project data type: Other
Scope:
Multispecies
Marson Lab, Gladstone-UCSF Institute of Genomic Immunology, J. David Gladstone Institutes
Accession:
PRJNA728974
ID:
728974
11.

Massively multiplex single-molecule oligonucleosome footprinting

Project data type: Other
Scope:
Multispecies
Ramani Lab, Biochemistry and Biophysics, University of California, San Francisco
Accession:
PRJNA681807
ID:
681807
12.

GO-CRISPR: a highly controlled workflow to improve discovery of gene essentiality

Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Western University
Accession:
PRJNA631657
ID:
631657
13.

Analysis of diversity in barcoded plasmid library

Taxonomy:
unidentified plasmid
Project data type: Other
Scope:
Monoisolate
Neurology, Brigham and Women's Hospital
Accession:
PRJNA630750
ID:
630750
14.

Quantitative-enhancer-FACS-seq (QeFS) reveals epistatic interactions among motifs within transcriptional enhancers in developing Drosophila tissue [plasmid]

Taxonomy:
unidentified plasmid
Project data type: Other
Scope:
Monoisolate
Martha L. Bulyk, Division of Genetics, Department of Medicine, Brigham and Women's Hospital
Accession:
PRJNA630417
ID:
630417
15.

Clades of huge phage from across Earth’s ecosystems

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
UNIVERSITY OF CALIFORNIA AT BERKELEY
Accession:
PRJEB35371
ID:
604365
16.

Global discovery of SLE genetic risk variant allelic enhancer activity

Project data type: Other
Scope:
Multispecies
Leah Kottyan, Center for Autoimmune Genomics and Etiology (CAGE), Cincinnati Children's Hospital Medical Center
Accession:
PRJNA601725
ID:
601725
17.

Genome-wide CRISPR screen of rituximab induced cell depletion

Project data type: Other
Scope:
Multispecies
Jacob Giehm Mikkelsen, Biomedicin, Aarhus University
Accession:
PRJNA579532
ID:
579532
18.

Assessing the ability of various genomic features to prioritize causal non-coding variants associated with diseases and traits [MPRA]

Project data type: Other
Scope:
Multispecies
Aviv Regev, The Broad Institute
Accession:
PRJNA563094
ID:
563094
19.

Tracing the transitions from pluripotency to germ cell fate with CRISPR screening

Project data type: Other
Scope:
Multispecies
Epigenetics & Neurobiology, European Molecular Biology Laboratory (EMBL)
Accession:
PRJNA482361
ID:
482361
20.

Environmental Plasmids

Environmental AR Plasmids - Genome Sequencing and Assembly

Taxonomy:
unidentified plasmid
Project data type: Genome sequencing and assembly
Scope:
Environment
James Madison Univesity
Accession:
PRJNA428773
ID:
428773

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