CRE global study (ID 771602) - BioProject

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Accession: PRJEB42440 ID: 771602

CRE global study

Comprehensive genomic survey of carbapenem-resistant Enterobacteriaceae in Spain

To get a wide view of the distribution, the characteristics and the mechanisms of resistance to carbapenem in Enterobacteria in Spain, 461 strains were isolated from 41 Spanish hospitals and sequenced both with long and short reads to perform hybrid assemblies which allowed us to define their genetic characteristics, the genomic mechanisms which bear the carbapenemase-enzymes, the mechanisms associated with other antimicrobials, the molecular epidemiology of 16S rRNA methyltransferases, and to define the gene clusters implicated in the successful spread of K. pneumoniae ST-15 in Spain.

Accession	PRJEB42440
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 15-Oct-2021 Centro Nacional de Análisis Genómico

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5008
WGS master	435
Genomic DNA	2065
SRA Experiments	2271
Protein Sequences	4181667
Other datasets
BioSample	437
Assembly	437

Assembly details:

Download

Assembly level

Number of Assemblies

365
31
41
437

Assembly	WGS	Chrs	BioSample	Isolate	Taxonomy
GCA_905219065.2		4	SAMEA7853256	8	Citrobacter freundii
GCA_905218895.2		3	SAMEA7853238	112	Citrobacter freundii
GCA_905232605.2		7	SAMEA7962748	18	Citrobacter freundii
GCA_905232395.2		2	SAMEA7962729	402	Citrobacter freundii
GCA_905232515.2		5	SAMEA7962742	22	Citrobacter freundii
GCA_905232695.2	CAJNLX000000000	5	SAMEA7962760	18	Citrobacter freundii
GCA_905232555.2		6	SAMEA7962746	18	Citrobacter freundii
GCA_905335675.2	CAJOXJ000000000	3	SAMEA8158486	0	Citrobacter freundii
GCA_905330765.2		5	SAMEA8065770	112	Citrobacter freundii
GCA_905329885.2		6	SAMEA8065677	22	Citrobacter freundii
GCA_905338045.2		8	SAMEA8158485	0	Citrobacter freundii
GCA_905335685.2		8	SAMEA8158487	22	Citrobacter freundii
GCA_905337805.2		4	SAMEA8158506	0	Citrobacter koseri
GCA_905337845.2		3	SAMEA8158505	0	Citrobacter koseri
GCA_905219325.2	CAJMWC000000000	10	SAMEA7853285	515	Enterobacter cloacae
GCA_905232655.2		5	SAMEA7962754	23	Enterobacter cloacae
GCA_905232645.2		5	SAMEA7962753	1379	Enterobacter cloacae
GCA_905232625.2		5	SAMEA7962752	1379	Enterobacter cloacae
GCA_905232525.2		5	SAMEA7962740	78	Enterobacter cloacae
GCA_905232495.2		5	SAMEA7962739	133	Enterobacter cloacae
GCA_905232485.2		4	SAMEA7962738	133	Enterobacter cloacae
GCA_905232475.2		5	SAMEA7962737	133	Enterobacter cloacae
GCA_905232685.2		5	SAMEA7962759	23	Enterobacter cloacae
GCA_905232045.2		5	SAMEA7962763	66	Enterobacter cloacae
GCA_905232075.2		4	SAMEA7962773	171	Enterobacter cloacae
GCA_905232125.2		5	SAMEA7962772	1379	Enterobacter cloacae
GCA_905232035.2		5	SAMEA7962771	78	Enterobacter cloacae
GCA_905231975.2		6	SAMEA7962770	23	Enterobacter cloacae
GCA_905232005.2	CAJNJB000000000	5	SAMEA7962767	171	Enterobacter cloacae
GCA_905231985.2		8	SAMEA7962766	78	Enterobacter cloacae
GCA_905232535.2		7	SAMEA7962743	171	Enterobacter cloacae
GCA_905232455.2		6	SAMEA7962733	78	Enterobacter cloacae
GCA_905219305.2		3	SAMEA7853283	742	Enterobacter cloacae
GCA_905219245.2		5	SAMEA7853278	96	Enterobacter cloacae
GCA_905219205.2		7	SAMEA7853274	515	Enterobacter cloacae
GCA_905219195.2		6	SAMEA7853273	96	Enterobacter cloacae
GCA_905217835.2		4	SAMEA7853270	171	Enterobacter cloacae
GCA_905333995.2	CAJOVW000000000	4	SAMEA8158455	732	Enterobacter cloacae
GCA_905333895.2	CAJOWK000000000	4	SAMEA8158454	114	Enterobacter cloacae
GCA_905233075.2		5	SAMEA7962818	24	Enterobacter cloacae
GCA_905233065.2		4	SAMEA7962815	1015	Enterobacter cloacae
GCA_905233055.2		4	SAMEA7962814	78	Enterobacter cloacae
GCA_905233045.2		5	SAMEA7962813	24	Enterobacter cloacae
GCA_905233035.2		6	SAMEA7962812	1380	Enterobacter cloacae
GCA_905232845.2		6	SAMEA7962793	78	Enterobacter cloacae
GCA_905232785.2		6	SAMEA7962791	110	Enterobacter cloacae
GCA_905232805.2		3	SAMEA7962789	125	Enterobacter cloacae
GCA_905232815.2		6	SAMEA7962787	182	Enterobacter cloacae
GCA_905232775.2		5	SAMEA7962786	114	Enterobacter cloacae
GCA_905330825.2	CAJNWF000000000	4	SAMEA8065776	1074	Enterobacter cloacae
GCA_905330885.2		5	SAMEA8065783	66	Enterobacter cloacae
GCA_905335585.2		5	SAMEA8158477	96	Enterobacter cloacae
GCA_905331255.2		5	SAMEA8065832	96	Enterobacter cloacae
GCA_905330335.2		8	SAMEA8065723	108	Enterobacter cloacae
GCA_905331095.2		5	SAMEA8065803	114	Enterobacter cloacae
GCA_905330795.2		5	SAMEA8065774	133	Enterobacter cloacae
GCA_905331265.2		3	SAMEA8065834	1382	Enterobacter cloacae
GCA_905331005.2		5	SAMEA8065795	171	Enterobacter cloacae
GCA_905330285.2		6	SAMEA8065717	133	Enterobacter cloacae
GCA_905329565.2		5	SAMEA8065826	182	Enterobacter cloacae
GCA_905322515.2		6	SAMEA8065681	78	Enterobacter cloacae
GCA_905329655.2		5	SAMEA8065845	78	Enterobacter cloacae
GCA_905334015.2		4	SAMEA8158443	662	Enterobacter cloacae
GCA_905331205.2		3	SAMEA8065814	1381	Enterobacter cloacae
GCA_905330345.2		5	SAMEA8065724	90	Enterobacter cloacae
GCA_905322485.2		6	SAMEA8065682	78	Enterobacter cloacae
GCA_905333945.2		6	SAMEA8158444	732	Enterobacter cloacae
GCA_905331215.2		6	SAMEA8065815	515	Enterobacter cloacae
GCA_905330125.2		5	SAMEA8065700	413	Enterobacter cloacae
GCA_905331365.2		6	SAMEA8065846	764	Enterobacter cloacae
GCA_905322535.2		4	SAMEA8065687	114	Enterobacter cloacae
GCA_905337795.2		5	SAMEA8158520	1383	Enterobacter cloacae
GCA_905338035.2		6	SAMEA8158515	168	Enterobacter cloacae
GCA_905335515.2		5	SAMEA8158470	171	Enterobacter cloacae
GCA_905335505.2		5	SAMEA8158463	114	Enterobacter cloacae
GCA_905330775.2		3	SAMEA8065771	78	Enterobacter cloacae
GCA_905330895.2		7	SAMEA8065784	131	Escherichia coli
GCA_905330955.2		10	SAMEA8065790	68	Escherichia coli
GCA_905330065.2		8	SAMEA8065689	624	Escherichia coli
GCA_905332395.2		5	SAMEA8065752	58	Escherichia coli
GCA_905330275.2		9	SAMEA8065716	648	Escherichia coli
GCA_905329835.2		3	SAMEA8065719	362	Escherichia coli
GCA_905330545.2		4	SAMEA8065748	538	Escherichia coli
GCA_905330875.2		3	SAMEA8065782	131	Escherichia coli
GCA_905330145.2		3	SAMEA8065704	410	Escherichia coli
GCA_905330215.2		8	SAMEA8065712	10	Escherichia coli
GCA_905330245.2		8	SAMEA8065713	10	Escherichia coli
GCA_905330295.2		5	SAMEA8065718	602	Escherichia coli
GCA_905331185.2		7	SAMEA8065812	10	Escherichia coli
GCA_905231995.2		5	SAMEA7962779	162	Escherichia coli
GCA_905331155.2	CAJNXN000000000	8	SAMEA8065809	131	Escherichia coli
GCA_905332385.2	CAJOCA000000000	3	SAMEA8065833	11106	Escherichia coli
GCA_905219285.2		6	SAMEA7853282	23	Escherichia coli
GCA_905219315.2		6	SAMEA7853286	131	Escherichia coli
GCA_905218875.2		3	SAMEA7853234	131	Escherichia coli
GCA_905330715.2	CAJNVV000000000	5	SAMEA8065764	10	Escherichia coli
GCA_905330995.2	CAJNWX000000000	8	SAMEA8065794	131	Escherichia coli
GCA_905330655.2	CAJNVP000000000	2	SAMEA8065756	131	Escherichia coli
GCA_905332365.1		1	SAMEA8065773	127	Escherichia coli
GCA_905332355.1		1	SAMEA8065684	127	Escherichia coli
GCA_905333855.2		3	SAMEA8158452	57	Klebsiella aerogenes
GCA_905338025.2		3	SAMEA8158514	328	Klebsiella oxytoca
GCA_905330855.2		9	SAMEA8065778	327	Klebsiella oxytoca
GCA_905329895.2		5	SAMEA8065679	202	Klebsiella oxytoca
GCA_905330835.2		3	SAMEA8065780	101	Klebsiella oxytoca
GCA_905333885.2		7	SAMEA8158457	36	Klebsiella oxytoca
GCA_905329555.2		5	SAMEA8065822	2	Klebsiella oxytoca
GCA_905322525.2		7	SAMEA8065686	145	Klebsiella oxytoca
GCA_905330865.2		3	SAMEA8065781	101	Klebsiella oxytoca
GCA_905330785.2		3	SAMEA8065772	326	Klebsiella oxytoca
GCA_905331245.2	CAJNXU000000000	4	SAMEA8065831	36	Klebsiella oxytoca
GCA_905331355.2	CAJNYH000000000	2	SAMEA8065843	2	Klebsiella oxytoca
GCA_905335785.2	CAJOXU000000000	6	SAMEA8158464	27	Klebsiella oxytoca
GCA_905232445.2		6	SAMEA7962732	324	Klebsiella oxytoca
GCA_905232115.2		4	SAMEA7962775	325	Klebsiella oxytoca
GCA_905231965.2		4	SAMEA7962774	15	Klebsiella pneumoniae
GCA_905232105.2		6	SAMEA7962762	147	Klebsiella pneumoniae
GCA_905232025.2		7	SAMEA7962761	326	Klebsiella pneumoniae
GCA_905232715.2		4	SAMEA7962758	147	Klebsiella pneumoniae
GCA_905232675.2		3	SAMEA7962757	405	Klebsiella pneumoniae
GCA_905232665.2		7	SAMEA7962756	147	Klebsiella pneumoniae
GCA_905232635.2		6	SAMEA7962755	326	Klebsiella pneumoniae
GCA_905232055.2		7	SAMEA7962765	147	Klebsiella pneumoniae
GCA_905232015.2		6	SAMEA7962764	326	Klebsiella pneumoniae
GCA_905231945.2		3	SAMEA7962769	567	Klebsiella pneumoniae
GCA_905232095.2		5	SAMEA7962768	147	Klebsiella pneumoniae
GCA_905232615.2		4	SAMEA7962751	147	Klebsiella pneumoniae
GCA_905232585.2		5	SAMEA7962750	405	Klebsiella pneumoniae
GCA_905232595.2		6	SAMEA7962749	15	Klebsiella pneumoniae
GCA_905232565.2		6	SAMEA7962745	15	Klebsiella pneumoniae
GCA_905232545.2		4	SAMEA7962744	147	Klebsiella pneumoniae
GCA_905232435.2	CAJNKY000000000	4	SAMEA7962731	15	Klebsiella pneumoniae
GCA_905232405.2		3	SAMEA7962730	11	Klebsiella pneumoniae
GCA_905232575.2		4	SAMEA7962747	485	Klebsiella pneumoniae
GCA_905232505.2		5	SAMEA7962741	11	Klebsiella pneumoniae
GCA_905232385.2		5	SAMEA7962727	392	Klebsiella pneumoniae
GCA_905219335.2		3	SAMEA7853288	258	Klebsiella pneumoniae
GCA_905219345.2		3	SAMEA7853287	307	Klebsiella pneumoniae
GCA_905219275.2		4	SAMEA7853281	512	Klebsiella pneumoniae
GCA_905219265.2		8	SAMEA7853280	273	Klebsiella pneumoniae
GCA_905219225.2		4	SAMEA7853277	678	Klebsiella pneumoniae
GCA_905219235.2		4	SAMEA7853276	512	Klebsiella pneumoniae
GCA_905219215.2		3	SAMEA7853275	512	Klebsiella pneumoniae
GCA_905219185.2		7	SAMEA7853269	307	Klebsiella pneumoniae
GCA_905219175.2		6	SAMEA7853268	307	Klebsiella pneumoniae
GCA_905219165.2		7	SAMEA7853267	307	Klebsiella pneumoniae
GCA_905217795.2	CAJMTX000000000	3	SAMEA7853272	104	Klebsiella pneumoniae
GCA_905217765.2		6	SAMEA7853271	15	Klebsiella pneumoniae
GCA_905219295.2		5	SAMEA7853284	1961	Klebsiella pneumoniae
GCA_905217875.2		4	SAMEA7853224	512	Klebsiella pneumoniae
GCA_905217775.2		3	SAMEA7853223	11	Klebsiella pneumoniae
GCA_905217895.2		3	SAMEA7853222	11	Klebsiella pneumoniae
GCA_905217825.2		6	SAMEA7853221	405	Klebsiella pneumoniae
GCA_905217815.2		4	SAMEA7853220	11	Klebsiella pneumoniae
GCA_905217785.2		3	SAMEA7853219	11	Klebsiella pneumoniae
GCA_905218865.2		3	SAMEA7853232	11	Klebsiella pneumoniae
GCA_905217865.2		4	SAMEA7853231	405	Klebsiella pneumoniae
GCA_905217725.2		7	SAMEA7853230	15	Klebsiella pneumoniae
GCA_905217845.2		4	SAMEA7853229	219	Klebsiella pneumoniae
GCA_905217905.2		5	SAMEA7853228	405	Klebsiella pneumoniae
GCA_905217885.2		4	SAMEA7853227	11	Klebsiella pneumoniae
GCA_905217855.2		3	SAMEA7853226	11	Klebsiella pneumoniae
GCA_905217755.2		2	SAMEA7853225	11	Klebsiella pneumoniae
GCA_905218905.2		4	SAMEA7853237	11	Klebsiella pneumoniae
GCA_905218915.2		4	SAMEA7853236	405	Klebsiella pneumoniae
GCA_905218885.2	CAJMUM000000000	4	SAMEA7853235	392	Klebsiella pneumoniae
GCA_905217745.2		7	SAMEA7853255	392	Klebsiella pneumoniae
GCA_905217805.2		7	SAMEA7853254	392	Klebsiella pneumoniae
GCA_905219125.2		7	SAMEA7853266	307	Klebsiella pneumoniae
GCA_905219155.2		8	SAMEA7853265	459	Klebsiella pneumoniae
GCA_905219145.2		7	SAMEA7853264	307	Klebsiella pneumoniae
GCA_905219105.2		2	SAMEA7853263	307	Klebsiella pneumoniae
GCA_905219115.2		7	SAMEA7853262	307	Klebsiella pneumoniae
GCA_905219135.2		7	SAMEA7853261	307	Klebsiella pneumoniae
GCA_905219095.2		7	SAMEA7853260	307	Klebsiella pneumoniae
GCA_905219085.2		7	SAMEA7853258	307	Klebsiella pneumoniae
GCA_905219075.2		6	SAMEA7853257	307	Klebsiella pneumoniae
GCA_905219055.2		5	SAMEA7853253	392	Klebsiella pneumoniae
GCA_905219005.2		5	SAMEA7853252	392	Klebsiella pneumoniae
GCA_905219035.2		6	SAMEA7853251	392	Klebsiella pneumoniae
GCA_905218995.2		5	SAMEA7853250	307	Klebsiella pneumoniae
GCA_905219025.2	CAJMVB000000000	3	SAMEA7853248	429	Klebsiella pneumoniae
GCA_905219015.2	CAJMUY000000000	7	SAMEA7853247	392	Klebsiella pneumoniae
GCA_905219045.2		7	SAMEA7853246	392	Klebsiella pneumoniae
GCA_905218955.2		4	SAMEA7853245	11	Klebsiella pneumoniae
GCA_905218945.2		5	SAMEA7853244	11	Klebsiella pneumoniae
GCA_905218965.2		3	SAMEA7853243	512	Klebsiella pneumoniae
GCA_905218925.2	CAJMUT000000000	5	SAMEA7853242	392	Klebsiella pneumoniae
GCA_905218935.2		2	SAMEA7853241	11	Klebsiella pneumoniae
GCA_905218985.2	CAJMUU000000000	2	SAMEA7853240	11	Klebsiella pneumoniae
GCA_905218975.2		3	SAMEA7853239	11	Klebsiella pneumoniae
GCA_905333955.2	CAJOVZ000000000	2	SAMEA8158459	392	Klebsiella pneumoniae
GCA_905334045.2	CAJOWJ000000000	4	SAMEA8158458	11	Klebsiella pneumoniae
GCA_905233085.2	CAJNNK000000000	4	SAMEA7962817	101	Klebsiella pneumoniae
GCA_905233095.2		5	SAMEA7962816	405	Klebsiella pneumoniae
GCA_905331075.2	CAJNXG000000000	8	SAMEA8065801	307	Klebsiella pneumoniae
GCA_905331065.2	CAJNXC000000000	10	SAMEA8065800	307	Klebsiella pneumoniae
GCA_905331055.2	CAJNXE000000000	6	SAMEA8065799	307	Klebsiella pneumoniae
GCA_905331465.2	CAJNYS000000000	3	SAMEA8065779	307	Klebsiella pneumoniae
GCA_905331435.2	CAJNYP000000000	5	SAMEA8065758	3362	Klebsiella pneumoniae
GCA_905233015.2		6	SAMEA7962810	307	Klebsiella pneumoniae
GCA_905233005.2		4	SAMEA7962809	437	Klebsiella pneumoniae
GCA_905232995.2		9	SAMEA7962808	437	Klebsiella pneumoniae
GCA_905232985.2		5	SAMEA7962807	307	Klebsiella pneumoniae
GCA_905232975.2		6	SAMEA7962806	11	Klebsiella pneumoniae
GCA_905232965.2		5	SAMEA7962805	307	Klebsiella pneumoniae
GCA_905232955.2	CAJNMZ000000000	5	SAMEA7962804	307	Klebsiella pneumoniae
GCA_905232935.2	CAJNMY000000000	5	SAMEA7962803	307	Klebsiella pneumoniae
GCA_905232945.2		6	SAMEA7962802	11	Klebsiella pneumoniae
GCA_905232925.2		6	SAMEA7962801	11	Klebsiella pneumoniae
GCA_905232895.2		6	SAMEA7962799	307	Klebsiella pneumoniae
GCA_905232885.2		4	SAMEA7962797	437	Klebsiella pneumoniae
GCA_905232875.2		6	SAMEA7962796	11	Klebsiella pneumoniae
GCA_905232865.2		6	SAMEA7962795	307	Klebsiella pneumoniae
GCA_905232855.2		6	SAMEA7962794	11	Klebsiella pneumoniae
GCA_905232085.2		3	SAMEA7962778	14	Klebsiella pneumoniae
GCA_905232065.2		8	SAMEA7962777	273	Klebsiella pneumoniae
GCA_905231955.2		4	SAMEA7962776	1961	Klebsiella pneumoniae
GCA_905232765.2		4	SAMEA7962785	5000	Klebsiella pneumoniae
GCA_905232755.2		3	SAMEA7962784	11	Klebsiella pneumoniae
GCA_905232725.2		3	SAMEA7962781	5000	Klebsiella pneumoniae
GCA_905232705.2		4	SAMEA7962780	5000	Klebsiella pneumoniae
GCA_905232795.2		4	SAMEA7962788	5000	Klebsiella pneumoniae
GCA_905331335.2	CAJNYF000000000	4	SAMEA8065840	307	Klebsiella pneumoniae
GCA_905331305.2	CAJNYB000000000	5	SAMEA8065837	307	Klebsiella pneumoniae
GCA_905331285.2	CAJNXZ000000000	4	SAMEA8065836	307	Klebsiella pneumoniae
GCA_905334035.2	CAJOWI000000000	3	SAMEA8158453	11	Klebsiella pneumoniae
GCA_905333875.2	CAJOWM000000000	2	SAMEA8158451	392	Klebsiella pneumoniae
GCA_905333925.2	CAJOWB000000000	3	SAMEA8158450	392	Klebsiella pneumoniae
GCA_905333835.2	CAJOVV000000000	2	SAMEA8158449	11	Klebsiella pneumoniae
GCA_905333845.2	CAJOVU000000000	4	SAMEA8158447	39	Klebsiella pneumoniae
GCA_905335625.2	CAJOXC000000000	7	SAMEA8158472	307	Klebsiella pneumoniae
GCA_905337995.2	CAJPEQ000000000	2	SAMEA8158511	15	Klebsiella pneumoniae
GCA_905335745.2	CAJOXP000000000	4	SAMEA8158494	307	Klebsiella pneumoniae
GCA_905335735.2	CAJOXQ000000000	6	SAMEA8158493	15	Klebsiella pneumoniae
GCA_905335695.2	CAJOXN000000000	2	SAMEA8158491	5000	Klebsiella pneumoniae
GCA_905330615.2	CAJNVK000000000	5	SAMEA8065751	45	Klebsiella pneumoniae
GCA_905330575.2	CAJNVE000000000	3	SAMEA8065750	11	Klebsiella pneumoniae
GCA_905330485.2	CAJNUY000000000	3	SAMEA8065737	11	Klebsiella pneumoniae
GCA_905330415.2	CAJNUP000000000	2	SAMEA8065732	11	Klebsiella pneumoniae
GCA_905330155.2	CAJNTS000000000	3	SAMEA8065706	45	Klebsiella pneumoniae
GCA_905330115.2	CAJNTP000000000	2	SAMEA8065698	512	Klebsiella pneumoniae
GCA_905323015.2	CAJNRS000000000	2	SAMEA8065696	512	Klebsiella pneumoniae
GCA_905322755.2	CAJNRQ000000000	2	SAMEA8065694	512	Klebsiella pneumoniae
GCA_905322745.2	CAJNRR000000000	2	SAMEA8065693	512	Klebsiella pneumoniae
GCA_905322475.2	CAJNRH000000000	2	SAMEA8065692	512	Klebsiella pneumoniae
GCA_905330025.2	CAJNTI000000000	2	SAMEA8065691	512	Klebsiella pneumoniae
GCA_905329875.2	CAJNTE000000000	3	SAMEA8065676	11	Klebsiella pneumoniae
GCA_905329865.2	CAJNTD000000000	3	SAMEA8065675	11	Klebsiella pneumoniae
GCA_905329855.2	CAJNTC000000000	3	SAMEA8065674	11	Klebsiella pneumoniae
GCA_905329845.2	CAJNTB000000000	3	SAMEA8065673	392	Klebsiella pneumoniae
GCA_905329505.2	CAJNRW000000000	3	SAMEA8065818	5000	Klebsiella pneumoniae
GCA_905330935.2	CAJNWR000000000	9	SAMEA8065788	307	Klebsiella pneumoniae
GCA_905330845.2	CAJNWG000000000	8	SAMEA8065777	326	Klebsiella pneumoniae
GCA_905330705.2	CAJNVU000000000	4	SAMEA8065763	392	Klebsiella pneumoniae
GCA_905330815.2	CAJNWE000000000	1	SAMEA8065775	258	Klebsiella pneumoniae
GCA_905330735.2	CAJNVZ000000000	7	SAMEA8065768	392	Klebsiella pneumoniae
GCA_905330745.2	CAJNVY000000000	3	SAMEA8065767	392	Klebsiella pneumoniae
GCA_905330755.2	CAJNVX000000000	4	SAMEA8065766	307	Klebsiella pneumoniae
GCA_905330975.2		12	SAMEA8065792	307	Klebsiella pneumoniae
GCA_905330985.2		10	SAMEA8065793	307	Klebsiella pneumoniae
GCA_905330965.2		10	SAMEA8065791	307	Klebsiella pneumoniae
GCA_905330905.2		4	SAMEA8065785	326	Klebsiella pneumoniae
GCA_905330725.2		5	SAMEA8065765	392	Klebsiella pneumoniae
GCA_905232835.2		4	SAMEA7962792	307	Klebsiella pneumoniae
GCA_905232375.2		5	SAMEA7962728	392	Klebsiella pneumoniae
GCA_905232915.2		6	SAMEA7962800	11	Klebsiella pneumoniae
GCA_905232745.2		4	SAMEA7962783	11	Klebsiella pneumoniae
GCA_905232825.2		6	SAMEA7962790	101	Klebsiella pneumoniae
GCA_905232735.2		5	SAMEA7962782	5000	Klebsiella pneumoniae
GCA_905232905.2		6	SAMEA7962798	11	Klebsiella pneumoniae
GCA_905330305.2		3	SAMEA8065672	11	Klebsiella pneumoniae
GCA_905329535.2		4	SAMEA8065821	11	Klebsiella pneumoniae
GCA_905331195.2		3	SAMEA8065813	1961	Klebsiella pneumoniae
GCA_905330605.2		3	SAMEA8065744	15	Klebsiella pneumoniae
GCA_905329735.2		4	SAMEA8065856	512	Klebsiella pneumoniae
GCA_905331415.2		6	SAMEA8065688	15	Klebsiella pneumoniae
GCA_905331395.2		5	SAMEA8065727	15	Klebsiella pneumoniae
GCA_905330225.2		6	SAMEA8065711	152	Klebsiella pneumoniae
GCA_905333935.2		4	SAMEA8158441	11	Klebsiella pneumoniae
GCA_905331175.2		5	SAMEA8065810	1961	Klebsiella pneumoniae
GCA_905331035.2		11	SAMEA8065797	307	Klebsiella pneumoniae
GCA_905322545.2		4	SAMEA8065759	392	Klebsiella pneumoniae
GCA_905330085.2		8	SAMEA8065703	1401	Klebsiella pneumoniae
GCA_905330635.2		6	SAMEA8065754	307	Klebsiella pneumoniae
GCA_905330095.2		5	SAMEA8065702	392	Klebsiella pneumoniae
GCA_905330435.2		3	SAMEA8065733	11	Klebsiella pneumoniae
GCA_905330325.2		2	SAMEA8065720	405	Klebsiella pneumoniae
GCA_905330495.2		4	SAMEA8065740	307	Klebsiella pneumoniae
GCA_905329605.2		4	SAMEA8065820	11	Klebsiella pneumoniae
GCA_905331025.2		10	SAMEA8065796	307	Klebsiella pneumoniae
GCA_905329705.2		4	SAMEA8065851	512	Klebsiella pneumoniae
GCA_905333965.2		3	SAMEA8158456	392	Klebsiella pneumoniae
GCA_905329585.2		4	SAMEA8065828	11	Klebsiella pneumoniae
GCA_905331045.2		4	SAMEA8065798	405	Klebsiella pneumoniae
GCA_905330255.2		6	SAMEA8065714	152	Klebsiella pneumoniae
GCA_905329545.2		4	SAMEA8065830	5000	Klebsiella pneumoniae
GCA_905330565.2		7	SAMEA8065747	307	Klebsiella pneumoniae
GCA_905322465.2		4	SAMEA8065685	405	Klebsiella pneumoniae
GCA_905333975.2		3	SAMEA8158446	5001	Klebsiella pneumoniae
GCA_905331375.2		6	SAMEA8065842	13	Klebsiella pneumoniae
GCA_905330675.2		3	SAMEA8065757	11	Klebsiella pneumoniae
GCA_905331405.2		2	SAMEA8065722	15	Klebsiella pneumoniae
GCA_905331385.2		8	SAMEA8065678	15	Klebsiella pneumoniae
GCA_905329595.2		3	SAMEA8065825	5000	Klebsiella pneumoniae
GCA_905330695.2		5	SAMEA8065761	340	Klebsiella pneumoniae
GCA_905330075.2		3	SAMEA8065697	512	Klebsiella pneumoniae
GCA_905330625.2		4	SAMEA8065753	11	Klebsiella pneumoniae
GCA_905329905.2		4	SAMEA8065680	15	Klebsiella pneumoniae
GCA_905330525.2		4	SAMEA8065743	307	Klebsiella pneumoniae
GCA_905331145.2		3	SAMEA8065808	11	Klebsiella pneumoniae
GCA_905329525.2		4	SAMEA8065819	5000	Klebsiella pneumoniae
GCA_905329575.2		4	SAMEA8065829	11	Klebsiella pneumoniae
GCA_905331425.2		8	SAMEA8065739	15	Klebsiella pneumoniae
GCA_905330135.2		6	SAMEA8065699	307	Klebsiella pneumoniae
GCA_905329715.2		5	SAMEA8065850	512	Klebsiella pneumoniae
GCA_905330505.2		7	SAMEA8065741	307	Klebsiella pneumoniae
GCA_905322495.2		7	SAMEA8065683	405	Klebsiella pneumoniae
GCA_905330375.2		3	SAMEA8065731	11	Klebsiella pneumoniae
GCA_905331225.2		4	SAMEA8065823	11	Klebsiella pneumoniae
GCA_905329625.2		4	SAMEA8065824	11	Klebsiella pneumoniae
GCA_905331235.2		5	SAMEA8065816	1961	Klebsiella pneumoniae
GCA_905331135.2		10	SAMEA8065807	307	Klebsiella pneumoniae
GCA_905331315.2		6	SAMEA8065838	307	Klebsiella pneumoniae
GCA_905329805.2		5	SAMEA8065669	15	Klebsiella pneumoniae
GCA_905333985.2		4	SAMEA8158448	11	Klebsiella pneumoniae
GCA_905329695.2		5	SAMEA8065852	512	Klebsiella pneumoniae
GCA_905329675.2		5	SAMEA8065847	512	Klebsiella pneumoniae
GCA_905331455.2		3	SAMEA8065769	307	Klebsiella pneumoniae
GCA_905330355.2		6	SAMEA8065725	39	Klebsiella pneumoniae
GCA_905329755.2		4	SAMEA8065857	512	Klebsiella pneumoniae
GCA_905331115.2		10	SAMEA8065805	5002	Klebsiella pneumoniae
GCA_905333915.2		4	SAMEA8158442	392	Klebsiella pneumoniae
GCA_905330585.2		4	SAMEA8065746	15	Klebsiella pneumoniae
GCA_905330445.2		2	SAMEA8065735	11	Klebsiella pneumoniae
GCA_905329515.2		4	SAMEA8065817	11	Klebsiella pneumoniae
GCA_905333905.2		5	SAMEA8158440	307	Klebsiella pneumoniae
GCA_905330105.2		5	SAMEA8065701	392	Klebsiella pneumoniae
GCA_905329785.2		6	SAMEA8065853	512	Klebsiella pneumoniae
GCA_905330165.2		4	SAMEA8065705	198	Klebsiella pneumoniae
GCA_905333865.2		3	SAMEA8158445	392	Klebsiella pneumoniae
GCA_905331105.2		3	SAMEA8065804	11	Klebsiella pneumoniae
GCA_905330915.2		6	SAMEA8065786	307	Klebsiella pneumoniae
GCA_905331125.2		9	SAMEA8065806	307	Klebsiella pneumoniae
GCA_905330185.2		7	SAMEA8065710	151	Klebsiella pneumoniae
GCA_905331275.2		6	SAMEA8065835	307	Klebsiella pneumoniae
GCA_905330455.2		2	SAMEA8065734	11	Klebsiella pneumoniae
GCA_905330195.2		6	SAMEA8065708	1083	Klebsiella pneumoniae
GCA_905330205.2		9	SAMEA8065709	147	Klebsiella pneumoniae
GCA_905329795.2		3	SAMEA8065859	512	Klebsiella pneumoniae
GCA_905330365.2		4	SAMEA8065728	11	Klebsiella pneumoniae
GCA_905330175.2		6	SAMEA8065707	307	Klebsiella pneumoniae
GCA_905331085.2		3	SAMEA8065802	11	Klebsiella pneumoniae
GCA_905330645.2		2	SAMEA8065755	11	Klebsiella pneumoniae
GCA_905322505.2		3	SAMEA8065690	11	Klebsiella pneumoniae
GCA_905329645.2		3	SAMEA8065844	628	Klebsiella pneumoniae
GCA_905331445.2		4	SAMEA8065760	392	Klebsiella pneumoniae
GCA_905330405.2		4	SAMEA8065726	307	Klebsiella pneumoniae
GCA_905330395.2		4	SAMEA8065729	11	Klebsiella pneumoniae
GCA_905329825.2		3	SAMEA8065671	1189	Klebsiella pneumoniae
GCA_905330595.2		3	SAMEA8065749	11	Klebsiella pneumoniae
GCA_905330925.2		3	SAMEA8065787	11	Klebsiella pneumoniae
GCA_905323025.2		3	SAMEA8065695	15	Klebsiella pneumoniae
GCA_905330685.2		2	SAMEA8065762	11	Klebsiella pneumoniae
GCA_905330465.2		4	SAMEA8065736	11	Klebsiella pneumoniae
GCA_905331325.2		5	SAMEA8065839	307	Klebsiella pneumoniae
GCA_905329765.2		5	SAMEA8065858	512	Klebsiella pneumoniae
GCA_905329725.2		4	SAMEA8065854	512	Klebsiella pneumoniae
GCA_905330945.2		2	SAMEA8065789	11	Klebsiella pneumoniae
GCA_905330475.2		7	SAMEA8065738	101	Klebsiella pneumoniae
GCA_905329775.2		5	SAMEA8065855	512	Klebsiella pneumoniae
GCA_905330315.2		4	SAMEA8065721	307	Klebsiella pneumoniae
GCA_905329685.2		2	SAMEA8065849	512	Klebsiella pneumoniae
GCA_905329615.2		4	SAMEA8065827	11	Klebsiella pneumoniae
GCA_905331165.2		4	SAMEA8065811	1961	Klebsiella pneumoniae
GCA_905329815.2		6	SAMEA8065670	15	Klebsiella pneumoniae
GCA_905329665.2		5	SAMEA8065848	512	Klebsiella pneumoniae
GCA_905335475.2		6	SAMEA8158468	326	Klebsiella pneumoniae
GCA_905337825.2		3	SAMEA8158522	512	Klebsiella pneumoniae
GCA_905335615.2		4	SAMEA8158480	11	Klebsiella pneumoniae
GCA_905335535.2		4	SAMEA8158462	392	Klebsiella pneumoniae
GCA_905337975.2		5	SAMEA8158504	15	Klebsiella pneumoniae
GCA_905335705.2		5	SAMEA8158488	1961	Klebsiella pneumoniae
GCA_905335555.2		3	SAMEA8158466	4387	Klebsiella pneumoniae
GCA_905337915.2		4	SAMEA8158498	405	Klebsiella pneumoniae
GCA_905337835.2		3	SAMEA8158501	551	Klebsiella pneumoniae
GCA_905335595.2		8	SAMEA8158473	307	Klebsiella pneumoniae
GCA_905335575.2		4	SAMEA8158474	11	Klebsiella pneumoniae
GCA_905337935.2		4	SAMEA8158517	11	Klebsiella pneumoniae
GCA_905337925.2		3	SAMEA8158509	15	Klebsiella pneumoniae
GCA_905338015.2		4	SAMEA8158513	11	Klebsiella pneumoniae
GCA_905337895.2		2	SAMEA8158507	15	Klebsiella pneumoniae
GCA_905335715.2		3	SAMEA8158490	5000	Klebsiella pneumoniae
GCA_905335635.2		7	SAMEA8158476	101	Klebsiella pneumoniae
GCA_905335765.2		3	SAMEA8158495	15	Klebsiella pneumoniae
GCA_905335485.2		6	SAMEA8158467	147	Klebsiella pneumoniae
GCA_905335665.2		4	SAMEA8158482	1962	Klebsiella pneumoniae
GCA_905337905.2		4	SAMEA8158503	392	Klebsiella pneumoniae
GCA_905335545.2		5	SAMEA8158469	147	Klebsiella pneumoniae
GCA_905335525.2		4	SAMEA8158461	11	Klebsiella pneumoniae
GCA_905335655.2		4	SAMEA8158475	11	Klebsiella pneumoniae
GCA_905335565.2		7	SAMEA8158481	101	Klebsiella pneumoniae
GCA_905335495.2		10	SAMEA8158471	307	Klebsiella pneumoniae
GCA_905337965.2		4	SAMEA8158519	11	Klebsiella pneumoniae
GCA_905335725.2		4	SAMEA8158492	307	Klebsiella pneumoniae
GCA_905337855.2		3	SAMEA8158510	15	Klebsiella pneumoniae
GCA_905335805.2		6	SAMEA8158497	147	Klebsiella pneumoniae
GCA_905337885.2		4	SAMEA8158516	11	Klebsiella pneumoniae
GCA_905337945.2		4	SAMEA8158518	11	Klebsiella pneumoniae
GCA_905335605.2		4	SAMEA8158479	11	Klebsiella pneumoniae
GCA_905337865.2		4	SAMEA8158521	1961	Klebsiella pneumoniae
GCA_905335795.2		4	SAMEA8158483	258	Klebsiella pneumoniae
GCA_905335815.2		5	SAMEA8158465	147	Klebsiella pneumoniae
GCA_905337815.2		6	SAMEA8158508	307	Klebsiella pneumoniae
GCA_905338005.2		5	SAMEA8158512	15	Klebsiella pneumoniae
GCA_905335465.2		5	SAMEA8158460	405	Klebsiella pneumoniae
GCA_905337985.2		9	SAMEA8158500	11	Klebsiella pneumoniae
GCA_905337875.2		2	SAMEA8158502	307	Klebsiella pneumoniae
GCA_905335755.2		2	SAMEA8158496	15	Klebsiella pneumoniae
GCA_905337955.2		5	SAMEA8158499	15	Klebsiella pneumoniae
GCA_905335645.2		5	SAMEA8158478	512	Klebsiella pneumoniae
GCA_905217735.2		7	SAMEA7853249	392	Klebsiella pneumoniae
GCA_905219355.1	CAJMWH000000000		SAMEA7853233	11	Klebsiella pneumoniae
GCA_905219365.1	CAJMWG000000000		SAMEA7853259	307	Klebsiella pneumoniae
GCA_905335835.1	CAJOXW000000000		SAMEA8158489	5000	Klebsiella pneumoniae
GCA_905331345.2		4	SAMEA8065841	0	Klebsiella quasipneumoniae
GCA_905335775.2	CAJOXS000000000	3	SAMEA8158439	0	Klebsiella variicola
GCA_905335825.2		4	SAMEA8158484	0	Klebsiella variicola
GCA_905219255.2		4	SAMEA7853279	0	Raoultella ornithinolytica
GCA_905330515.2		2	SAMEA8065742	0	Serratia marcescens
GCA_905330555.2		3	SAMEA8065745	0	Serratia marcescens
GCA_905330265.2		2	SAMEA8065715	0	Serratia marcescens
GCA_905330385.2		2	SAMEA8065730	0	Serratia marcescens
GCA_905232415.2		7	SAMEA7962736	0	Serratia marcescens
GCA_905232465.2		6	SAMEA7962735	0	Serratia marcescens
GCA_905232425.2		4	SAMEA7962734	0	Serratia marcescens
GCA_905233025.2		3	SAMEA7962811	0	Serratia marcescens

SRA Data Details

Parameter	Value
Data volume, Gbases	818
Data volume, Tbytes	0.55

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CRE global study

Comprehensive genomic survey of carbapenem-resistant Enterobacteriaceae in Spain

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