This is a longitudinal collection of CRE isolates collected at a New York City hospital over a 10 year time period to determine their population structure and mechanisms of resistance and transmission.
| Accession | PRJNA1133668 |
| Data Type | Raw sequence reads |
| Scope | Multispecies |
| Grants | - "Elucidating transmission of plasmids harboring blaKPC among carbapenem-resistant Enterobacteriaceae using long-range sequencing" (Grant ID K23 AI137316, National Institute of Allergy and Infectious Diseases Extramural Activities)
- "Operationalizing wastewater-based surveillance of multidrug-resistant bacteria" (Grant ID K99 AI163348, National Institute of Allergy and Infectious Diseases Extramural Activities)
- "Carbapenem-resistant bacterial colonization and infection after liver transplant" (Grant ID R01 AI116939, National Institute of Allergy and Infectious Diseases Extramural Activities)
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| Submission | Registration date: 9-Jul-2024
Columbia University Medical Center |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 435 |
| Other datasets |
| BioSample | 434 |