Mus musculus (ID 179303) - BioProject

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Accession: PRJNA179303 ID: 179303

Mus musculus (house mouse)

Changes in histone modifications H3K4me2, H3k27me3 and H3K36me3 due to phenobarbital in mice

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This project is a component of the IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers

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10 additional projects are components of the IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers.

67439 additional projects are related by organism.

29-32 days old male mice where either treated with Phenobarbital or untreated Overall design: Replicated control/treated study with IP and Input per group and antibody

Accession	PRJNA179303; GEO: GSE41399
Data Type	Epigenomics
Scope	Multiisolate
Organism	Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications	Thomson JP et al., "DNA immunoprecipitation semiconductor sequencing (DIP-SC-seq) as a rapid method to generate genome wide epigenetic signatures.", Sci Rep, 2015 May 14;5:9778 Thomson JP et al., "Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome.", Genome Biol, 2012 Oct 3;13(10):R93
Submission	Registration date: 5-Oct-2012 Meehan, MRC Human Genetics Unit, University of Edinburgh
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	24
Publications
PubMed	2
PMC	2
Other datasets
BioSample	24
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	364

SRA Data Details

Parameter	Value
Data volume, Gbases	74
Data volume, Mbytes	48335

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Mus musculus (house mouse)

Changes in histone modifications H3K4me2, H3k27me3 and H3K36me3 due to phenobarbital in mice

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