mollusc metagenome (ID 377790) - BioProject

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Accession: PRJNA377790 ID: 377790

mollusc metagenome

Extensive thioautotrophic gill endosymbiont diversity within a single Ctena orbiculata (Bivalvia:Lucinidae) population and implications for defining host-symbiont specificity and species recognition

Interspecific genetic diversity among thioautotrophic gammaproteobacterial gill endosymbionts in the lucinid bivalve Ctena orbiculata (Bivalvia:Lucinidae)

Accession	PRJNA377790
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	mollusc metagenome[Taxonomy ID: 1417798] unclassified sequences; metagenomes; organismal metagenomes; mollusc metagenome
Publications	Lim SJ et al., "Extensive Thioautotrophic Gill Endosymbiont Diversity within a Single Ctena orbiculata (Bivalvia: Lucinidae) Population and Implications for Defining Host-Symbiont Specificity and Species Recognition.", mSystems, 2019 Aug 27;4(4) Published online: Lim S et al., "Extensive Thioautotrophic Gill Endosymbiont Diversity within a SingleCtena orbiculata(Bivalvia: Lucinidae) Population and Implications for Defining Host-Symbiont Specificity and Species Recognition", mSystems, 2019;4(4)
Grants	"Functional diversity of chemosymbiosis in lucinid bivalves from coastal biomes" (Grant ID NSF DEB 1342763, National Science Foundation)
Submission	Registration date: 22-Apr-2018 Clemson University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2856
WGS master	11
SRA Experiments	43
Protein Sequences	42590
Publications
PubMed	1
PMC	1
Other datasets
BioSample	33
Assembly	11

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

11
11

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_003094575.1	NATU00000000	SAMN06473048	-	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003094535.1	NATV00000000	SAMN06473050	-	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003094555.1	NATW00000000	SAMN06473049	-	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003094515.1	NATR00000000	SAMN06472901	-	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003094475.1	NATT00000000	SAMN06472904	-	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003094495.1	NATS00000000	SAMN06472902	-	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003058535.1	QBVE00000000	SAMN08891715	LUC_16_020_40_E2	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003058545.1	QBVF00000000	SAMN08891714	LUC_16_020_40_E1	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003058525.1	QBVD00000000	SAMN08891716	LUC_16_020_40_F	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003058495.1	QBVC00000000	SAMN08891717	LUC_16_021_0_D	gamma proteobacterium symbiont of Ctena orbiculata
GCA_003058485.1	QBVG00000000	SAMN08891713	LUC_16_020_40_C	gamma proteobacterium symbiont of Ctena orbiculata

SRA Data Details

Parameter	Value
Data volume, Gbases	231
Data volume, Mbytes	94271

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mollusc metagenome

Extensive thioautotrophic gill endosymbiont diversity within a single Ctena orbiculata (Bivalvia:Lucinidae) population and implications for defining host-symbiont specificity and species recognition

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