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Accession: PRJNA393749 ID: 393749

Staphylococcus aureus

Colonizing and infecting subclones diverge during Staphylococcus aureus infection

See Genome Information for Staphylococcus aureus
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6504 additional projects are related by organism.
Complete genome sequences from clone pairs obtained from colonizing and infected sites of individual bacteremic patients in whom S. More...
AccessionPRJNA393749
Data TypeAssembly
ScopeMultiisolate
OrganismStaphylococcus aureus[Taxonomy ID: 1280]
Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
Publications
  • Altman DR et al., "Genome Plasticity of agr-Defective Staphylococcus aureus during Clinical Infection.", Infect Immun, 2018 Oct;86(10)
  • von Eiff C et al., "Nasal carriage as a source of Staphylococcus aureus bacteremia. Study Group.", N Engl J Med, 2001 Jan 4;344(1):11-6
Grants
  • "the New York State Empire Clinical Research Investigator Program" (Grant ID n/a, New York State Department of Health)
  • "Multiscale analysis of immune profiling data from dengue and chikungunya virus infections in humans" (Grant ID F30 AI122673, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "Role of precipitous virulence in invasiveness of community-acquired methicillin-r" (Grant ID R01 AI103268, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "Investigating genomic factors and microbiome features that impact CDI transmission and prognosis" (Grant ID R01 AI119145, National Institute of Allergy and Infectious Diseases Extramural Activities)
  • "n/a" (Grant ID HHSN272201400019C, National Institute of Allergy and Infectious Diseases)
  • "NRSA Institutional Research Training Grant for Global Health Research" (Grant ID T32 AI 7647, National Institute of Allergy and Infectious Diseases)
  • "n/a" (Grant ID T32 AI007180, National Institute of Allergy and Infectious Diseases)
  • "n/a" (Grant ID KL2 TR001435, National Center for Advancing Translational Sciences)
SubmissionRegistration date: 10-Jul-2017
Icahn School of Medicine
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)40
SRA Experiments8
Protein Sequences67703
Publications
PubMed2
PMC1
Other datasets
BioSample39
GEO DataSets1
Assembly26
Assembly details:
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases21
Data volume, Mbytes8262

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    Colonizing and infecting subclones diverge during Staphylococcus aureus infection
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