Droplet-based single-cell RNA-sequencing facilita... (ID 714643) - BioProject

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Accession: PRJNA714643 ID: 714643

Droplet-based single-cell RNA-sequencing facilitates trancritption analysis of small intestine CD4 cells from Germline free Xbp1ΔIEC and Xbp1fl/fl (house mouse)

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70920 additional projects are related by organism.

We performed theDroplet-based single-cell RNA-sequencing on small intestine CD4 cells from Germline free(GF) Xbp1ΔIEC and Xbp1fl/fl mice and found the effect of ER stress in epithelia cells on CD4 cells. More...

Accession	PRJNA714643; GEO: GSE168947
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications	Duan J et al., "Endoplasmic reticulum stress in the intestinal epithelium initiates purine metabolite synthesis and promotes Th17 cell differentiation in the gut.", Immunity, 2023 May 9;56(5):1115-1131.e9
Submission	Registration date: 15-Mar-2021 Brigham and Women' hospital
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	2
Publications
PubMed	1
PMC	1
Other datasets
BioSample	2
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	35

SRA Data Details

Parameter	Value
Data volume, Gbases	70
Data volume, Mbytes	22387

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Droplet-based single-cell RNA-sequencing facilitates trancritption analysis of small intestine CD4 cells from Germline free Xbp1ΔIEC and Xbp1fl/fl (house mouse)

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