This dataset is being generated to investigate the genomic epidemiology and AMR in Enterococcus sp in Victoria, Australia
| Accession | PRJNA856406 |
| Data Type | Raw sequence reads |
| Scope | Multispecies |
| Publications (total 6) Less... | - Sherry NL et al., "An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance.", Nat Commun, 2023 Jan 4;14(1):60
More...- Sherry NL et al., "An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance.", Nat Commun, 2023 Jan 4;14(1):60
- Sherry NL et al., "Multi-site implementation of whole genome sequencing for hospital infection control: A prospective genomic epidemiological analysis.", Lancet Reg Health West Pac, 2022 Jun;23:100446
- Higgs C et al., "Optimising genomic approaches for identifying vancomycin-resistant Enterococcus faecium transmission in healthcare settings.", Nat Commun, 2022 Jan 26;13(1):509
- Douglas AP et al., "Utilizing genomic analyses to investigate the first outbreak of vanA vancomycin-resistant Enterococcus in Australia with emergence of daptomycin non-susceptibility.", J Med Microbiol, 2019 Mar;68(3):303-308
- Lee RS et al., "The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study.", J Antimicrob Chemother, 2018 Dec 1;73(12):3268-3278
- Carter GP et al., "Emergence of endemic MLST non-typeable vancomycin-resistant Enterococcus faecium.", J Antimicrob Chemother, 2016 Dec;71(12):3367-3371
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| Submission | Registration date: 7-Jul-2022
Microbiological Diagnostic Unit Public Health Laboratory |
| Related Resources | |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 1313 |
| Publications |
| PubMed | 6 |
| PMC | 3 |
| Other datasets |
| BioSample | 1298 |