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Accession: PRJNA663267 ID: 663267

Danaus plexippus (monarch butterfly)

Danaus plexippus genome assembly, annotation and expression atlas

See Genome Information for Danaus plexippus
The monarch butterfly epitomizes biodiversity decline, and for understanding its unique adaptations, genomic resources that better incorporate the functional-species diversity are required. More...
AccessionPRJNA663267
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismDanaus plexippus[Taxonomy ID: 13037]
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Danainae; Danaini; Danaina; Danaus; Danaus; Danaus plexippus
PublicationsRanz JM et al., "A de novo transcriptional atlas in Danaus plexippus reveals variability in dosage compensation across tissues.", Commun Biol, 2021 Jun 25;4(1):791
Grants
  • "Generation of a de novo Genome Assembly and Gene Annotation for the Monarch Butterfly Danaus plexippus" (Grant ID CN-17-151, UNIVERSITY OF CALIFORNIA INSTITUTE FOR MEXICO AND THE UNITED STATES)
SubmissionRegistration date: 23-Apr-2021
Langebio / CINVESTAV
RelevanceBiodiversity
Locus Tag PrefixIDJ78
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)24
WGS master1
SRA Experiments38
Publications
PubMed1
PMC1
Other datasets
BioSample37
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases358
Data volume, Tbytes0.14
Related RefSeq Project
PRJNA1036715 : Danaus plexippus RefSeq Genome sequencing and assembly

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