See
Genome Information for Brachypodium distachyon
Brachypodium distachyon is recognized as a new model species for comparative and functional genomics of cereals and bioenergy crops. Using strain Bd21 as the source of DNA, a WGS project was performed at the DOE Joint Genome Institute.
| Accession | PRJNA32607 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Brachypodium distachyon[Taxonomy ID: 15368] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium; Brachypodium distachyon |
| Publications (total 6) Less... | - International Brachypodium Initiative "Genome sequencing and analysis of the model grass Brachypodium distachyon.", Nature, 2010 Feb 11;463(7282):763-8
- Gu YQ et al., "A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.", BMC Genomics, 2009 Oct 27;10:496
- Wolny E et al., "Comparative cytogenetic analysis of the genomes of the model grass Brachypodium distachyon and its close relatives.", Ann Bot, 2009 Oct;104(5):873-81
- Kumar S et al., "Orthology between genomes of Brachypodium, wheat and rice.", BMC Res Notes, 2009 May 27;2:93
- Huo N et al., "Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat.", Plant Mol Biol, 2009 May;70(1-2):47-61
- Bortiri E et al., "The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes.", BMC Res Notes, 2008 Jul 31;1:61
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| Submission | Registration date: 10-Feb-2010
The International Brachypodium Initiative |
| Related Resources | |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 20 |
| WGS master | 1 |
| SRA Experiments | 125 |
| Capillary Traces (Trace Archive) | 1 |
| Protein Sequences | 52972 |
| Publications |
| PubMed | 6 |
| PMC | 4 |
| Other datasets |
| BioSample | 31 |
| Assembly | 1 |