99 Lives Cat Genome Sequencing Initiative – a public effort to discover cat genetic variation and to improve feline & human health!
The 99 Lives Project will sequence the genome of 99 cats in order to:
– Improve coverage of the cat genome
– Improve future assemblies of the cat genome
– Identify normal and abnormal genetic variation
– Identify causative mutations for specific health concerns
– Allow veterinary hospitals to provide individual genome sequencing for cats for state of the art health care (similar to the developing standard of care for humans)
| Accession | PRJNA308208 |
| Type | Umbrella project |
| Publications | Gandolfi B et al., "COLQ variant associated with Devon Rex and Sphynx feline hereditary myopathy.", Anim Genet, 2015 Dec;46(6):711-5 |
| Submission | Registration date: 7-Jan-2016
99 Lives Cat Sequencing Initiative |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 552 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 429 |
Feline encompasses the following 15 sub-projects:
| Project Type | Number of Projects |
| Genome sequencing |
15
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA987755 | SRA or Trace | 99 Lives Cat Genome Sequencing Initiative | 99 Lives Cat Genome Sequencing Initiative (University of Missouri) | | PRJNA999287 | SRA or Trace | 99 Lives Cat Genome Sequencing Initiative - Toby(Fcat 23286) | 99 Lives Cat Genome Sequencing Initiative - Toby(Fcat 23286) (University of Missouri) | | PRJNA614458 | SRA or Trace | 99 Lives Whole Genome Sequencing | 99 Lives Whole Genome Sequencing (University of Missouri) | | PRJNA557464 | SRA or Trace | Feline Chediak-Higashi syndrome | Feline Chediak-Higashi syndrome (99 Lives Cat Genome Sequencing...) | | PRJNA296480 | SRA or Trace | Felis catus | Exotic felids raw sequence reads (Maverix Biomics) |
List all 15 'Genome sequencing' projects...BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA987755 | SRA or Trace | 99 Lives Cat Genome Sequencing Initiative | 99 Lives Cat Genome Sequencing Initiative (University of Missouri) | | PRJNA999287 | SRA or Trace | 99 Lives Cat Genome Sequencing Initiative - Toby(Fcat 23286) | 99 Lives Cat Genome Sequencing Initiative - Toby(Fcat 23286) (University of Missouri) | | PRJNA614458 | SRA or Trace | 99 Lives Whole Genome Sequencing | 99 Lives Whole Genome Sequencing (University of Missouri) | | PRJNA557464 | SRA or Trace | Feline Chediak-Higashi syndrome | Feline Chediak-Higashi syndrome (99 Lives Cat Genome Sequencing...) | | PRJNA296480 | SRA or Trace | Felis catus | Exotic felids raw sequence reads (Maverix Biomics) | | PRJNA288177 | SRA or Trace | Felis catus | Felis catus Raw sequence reads (Maverix Biomics) | | PRJNA312519 | SRA or Trace | Felis catus | Felis catus Raw sequence reads (99 Lives Cat Genome Sequencing...) | | PRJNA343385 | SRA or Trace | Felis catus | Felis catus trio and duo raw sequencing reads (99 Lives Consortium) | | PRJNA343387 | SRA or Trace | Felis catus | Felis catus British Shorthair Duo (99 Lives Consortium) | | PRJNA343389 | SRA or Trace | Felis catus | Felis catus multi-region domestic shorthair (99 Lives Consortium) | | PRJNA343390 | SRA or Trace | Felis catus | Felis catus Maine Coon Cross and Siamese (99 Lives Consortium) | | PRJNA343391 | SRA or Trace | Felis catus | Felis catus multi-breed raw sequence reads (99 Lives Consortium) | | PRJNA343392 | SRA or Trace | Felis catus | Felis catus Raw sequence reads (99 Lives Consortium) | | PRJNA528515 | SRA or Trace | Felis catus methemoglobinemia (99 Lives Consortium) | Felis catus methemoglobinemia (99 Lives Consortium) (99 Lives Consortium) | | PRJNA627536 | SRA or Trace | Whole exome sequencing of Felis catus | Whole exome sequencing of Felis catus (University of Missouri) |
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