ID 997766 - BioProject

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Accession: PRJNA997766 ID: 997766

Applied Genomics Initiative

https://appliedgenomics.csiro.au/

Initiative to drive democratisation of applied genomics for agricultural, environmental, biosecurity and health domains.

Accession	PRJNA997766
Type	Umbrella project
Submission	Registration date: 24-Jul-2023 Applied Genomics Initiative - CSIRO
Related Resources	Applied Genomics Initiative
Relevance	Multiple domains of relevance

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	379121
WGS master	90
Genomic DNA	79
Transcript	332032
SRA Experiments	148
Protein Sequences	289491
Publications
PubMed	4
Other datasets
BioSample	109
PopSet	2
Assembly	90

SRA Data Details

Parameter	Value
Data volume, Gbases	2,859
Data volume, Tbytes	1.02

This project encompasses the following 43 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Chromosomes
Scaffolds
Contigs
No data links
Total

11
3
28
1
43

BioProject accession	Assembly level	Name	Title
PRJNA996229	Contigs	Acanthaster planci	Acanthaster planci genome (CSIRO Applied Genomics Initiative)
PRJNA995347	Contigs	Achroia grisella	Achroia grisella (lesser wex moth) genome (CSIRO Applied Genomics Initiative)
PRJNA1007749	Contigs	Achroia grisella	Achroia grisella RefSeq BioProject (NCBI)
PRJNA1013826	Contigs	Acropora spathulata	Acropora spathulata genome (CSIRO Applied Genomics Initiative)
PRJNA913637	Scaffolds	Anoplolepis gracilipes	Anoplolepis gracilipes (Yellow Crazy Ant) genome (Rahul Vivek Rane)

List all 43 'Genome sequencing' projects...

BioProject accession	Assembly level	Name	Title
PRJNA996229	Contigs	Acanthaster planci	Acanthaster planci genome (CSIRO Applied Genomics Initiative)
PRJNA995347	Contigs	Achroia grisella	Achroia grisella (lesser wex moth) genome (CSIRO Applied Genomics Initiative)
PRJNA1007749	Contigs	Achroia grisella	Achroia grisella RefSeq BioProject (NCBI)
PRJNA1013826	Contigs	Acropora spathulata	Acropora spathulata genome (CSIRO Applied Genomics Initiative)
PRJNA913637	Scaffolds	Anoplolepis gracilipes	Anoplolepis gracilipes (Yellow Crazy Ant) genome (Rahul Vivek Rane)
PRJNA833907	Chromosomes	Bactrocera neohumeralis	Bactrocera neohumeralis isolate:Rockhampton Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA560467	Chromosomes	Bactrocera tryoni	Bactrocera tryoni isolate:S06 Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA904017	Contigs	Centroberyx gerrardi	Centroberyx gerrardi genome (CSIRO Applied Genomics Initiative)
PRJNA798169	Contigs	Ceriodaphnia dubia	Ceriodaphnia dubia strain:CSIRO Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA798166	Contigs	Chironomus tepperi	Chironomus tepperi strain:1889 Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA1001821	Contigs	Creontiades dilutus	Creontiades dilutus (green mirid) genome (CSIRO Applied Genomics Initiative)
PRJNA996309	Scaffolds	Crown of thorns (female) genome	Crown of thorns (female) genome (CSIRO Applied Genomics Initiative)
PRJNA798159	Chromosomes	Daphnia carinata	Daphnia carinata strain:CSIRO-1 Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA1001588	Contigs	Dermolepida albohirtum	Dermolepida albohirtum (Greyback cane beetle) genome (CSIRO Applied Genomics Initiative)
PRJNA879275	Contigs	Emydura macquarii macquarii	Emydura macquarii macquarii (Murray River turtle) genome (CSIRO Applied Genomics Initiative)
PRJNA1122207	Contigs	Emydura macquarii macquarii	Emydura macquarii macquarii (Murray River turtle) genome (NCBI)
PRJNA898089	Scaffolds	Fish	Reference sequences for Australian freshwater fishes: Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA893711	Contigs	Galleria mellonella	Galleria mellonella genome (CSIRO Applied Genomics Initiative)
PRJNA1012825	Contigs	Gastrolobium bilobum	Gastrolobium bilobum genome (CSIRO Applied Genomics Initiative)
PRJNA1012807	Contigs	Gastrolobium villosum	Gastrolobium villosum genome (CSIRO Applied Genomics Initiative)
PRJNA1013038	Chromosomes	Heteronotia binoei	Heteronotia binoei genome (CSIRO Applied Genomics Initiative)
PRJNA1026920	Chromosomes	Heteronotia binoei	Heteronotia binoei RefSeq Genome sequencing (NCBI)
PRJNA1000277	Contigs	Kuschelorhynchus macadamiae	Kuschelorhynchus macadamiae (Macadamia seed weevil) genome (CSIRO Applied Genomics Initiative)
PRJNA799061	Chromosomes	Lolium rigidum	Lolium rigidum isolate:Fournier-level lab strain Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA911933	Chromosomes	Lycium ferocissimum	Lycium ferocissimum genome sequencing (CSIRO Applied Genomics Initiative)
PRJNA1008610	Chromosomes	Lycium ferocissimum	Lycium ferocissimum isolate: CSIRO_LF1 RefFSeq BioProject (NCBI)
PRJNA1000645	Contigs	Musca vetustissima	Musca vetustissima (bushfly) genome (CSIRO Applied Genomics Initiative)
PRJNA912258	Contigs	Pezoporus wallicus	Pezoporus wallicus (Eastern Ground Parrot) genome (CSIRO Applied Genomics Initiative)
PRJNA1000218	Contigs	Pocillopora verrucosa	Pocillopora verrucosa (cauliflower coral) genome (CSIRO Applied Genomics Initiative)
PRJNA1006417	No data links	Pocillopora verrucosa	Pocillopora verrucosa isolate:Pver-AG016-CSIRO1 RefSeq BioProject (NCBI)
PRJNA803269	Chromosomes	Raphanus raphanistrum	Raphanus raphanistrum isolate:CSIRO-KN1 Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA574245	Chromosomes	Rattus rattus	Rattus rattus isolate:New Zealand Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA1000703	Contigs	Saccostrea cucullata	Saccostrea cucullata (hooded oyster) genome (CSIRO Applied Genomics Initiative)
PRJNA1071555	Contigs	Saccostrea cucullata	Saccostrea cucullata isolate:strain A RefSeq Genome sequencing (NCBI)
PRJNA1015632	Contigs	Saccostrea echinata	Saccostrea echinata (Sydney rock oyster) genome (CSIRO Applied Genomics Initiative)
PRJNA1046542	Contigs	Saccostrea echinata	Saccostrea echinata RefSeq Genome sequencing (NCBI)
PRJNA809428	Chromosomes	Spodoptera frugiperda	Spodoptera frugiperda isolate:SF20-4 Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA1000647	Contigs	Stylophora pistillata	Stylophora pistillata (smooth cauliflower coral) genome (CSIRO Applied Genomics Initiative)
PRJNA911005	Contigs	Tineola bisselliella	Tineola bisselliella isolate:Ti02 Genome sequencing and assembly (CSIRO Applied Genomics Initiative)
PRJNA1002986	Contigs	Ylistrum balloti	Ylistrum balloti genome (CSIRO Applied Genomics Initiative)
PRJNA1023226	Contigs	Ylistrum balloti	Ylistrum balloti RefSeq BioProject (NCBI)
PRJNA1015527	Contigs	Zophobas morio	Zophobas morio (superworm) genome (CSIRO Applied Genomics Initiative)
PRJNA1087301	Contigs	Zophobas morio	Zophobas morio RefSeq Genome sequencing (NCBI)

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