See
Genome Information for Pongo abelii
This is the Pongo abelii sample AG06213/GM06213 (ToLID: mPonAbe1). This includes autosomes from one pseudohaplotype, chrX, chrY, MT, and unplaced sequences not assigned to a pseudohaplotype. This assembly was generated with Verkko using PacBio Hifi and ONT UL data. Graph phasing to inform path selection was done using Hi-C information.
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 98698 |
| WGS master | 2 |
| Transcript | 98594 |
| SRA Experiments | 29 |
| Protein Sequences | 81503 |
| Publications |
| PubMed | 2 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes SRA or Trace Total |
3
1
4
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA916743 | Chromosomes | Pongo abelii | Pongo abelii Genome sequencing and assembly (National Human Genome Research...) | | PRJNA916741 | Chromosomes | Pongo abelii | Pongo abelii Genome sequencing and assembly (National Human Genome Research...) | | PRJNA944618 | Chromosomes | Pongo abelii | Pongo abelii RefSeq BioProject (NCBI) | | PRJNA976700 | SRA or Trace | Pongo abelii | Pongo abelii isolate:AG06213 Raw sequence reads (National Human Genome Research...) |
|