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Accession: PRJNA930783 ID: 930783

Pan paniscus Umbrella project

See Genome Information for Pan paniscus
This is the Pan paniscus sample PR00251 (ToLID: mPanPan1). This includes the maternal autosomes, chrX, MT, and unplaced sequence identified as maternal. This assembly was generated with Verkko using PacBio Hifi and ONT UL data. Graph phasing to inform path selection was done using trio information (i.e., Illumins short reads from each parent).
AccessionPRJNA930783
TypeUmbrella project
OrganismPan paniscus[Taxonomy ID: 9597]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan; Pan paniscus
SubmissionRegistration date: 2-Feb-2023
National Human Genome Research Institute, National Institutes of Health
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)95309
WGS master3
Transcript95178
SRA Experiments29
Protein Sequences81349
Publications
PubMed4
PMC2
Other datasets
BioSample3
Assembly3
SRA Data Details
ParameterValue
Data volume, Gbases3,278
Data volume, Tbytes1.29
This project encompasses the following 5 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

4
1
5
BioProject
accession
Assembly
level
OrganismTitle
PRJNA916735 ChromosomesPan paniscusPan paniscus Genome sequencing and assembly (National Human Genome Research...)
PRJNA916734 ChromosomesPan paniscusPan paniscus Genome sequencing and assembly (National Human Genome Research...)
PRJNA942951 ChromosomesPan paniscusPan paniscus Genome sequencing and assembly (National Human Genome Research...)
PRJNA950461 ChromosomesPan paniscusPan paniscus RefSeq BioProject (NCBI)
PRJNA986878 SRA or TracePan paniscusPan paniscus Raw sequence reads (National Human Genome Research...)

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