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Accession: PRJEB5241 ID: 297639

WGS sequencing of Fabeae

Repeat characterization in Fabeae genomes

Characterization of sequence diversity and abundance of repetitive DNA elements in genomes of selected plant species using bioinformatic analysis of low-pass WGS data. This study focuses on legume tribe Fabeae including the genera of Vicia, Lathyrus, Pisum and Lens.
AccessionPRJEB5241
ScopeMonoisolate
Publications
  • Ávila Robledillo L et al., "Satellite DNA in Vicia faba is characterized by remarkable diversity in its sequence composition, association with centromeres, and replication timing.", Sci Rep, 2018 Apr 11;8(1):5838
  • Macas J et al., "In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.", PLoS One, 2015;10(11):e0143424
SubmissionRegistration date: 2-Oct-2015
biology centre, czech academy of sciences
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments57
Publications
PubMed2
PMC2
Other datasets
BioSample51
SRA Data Details
ParameterValue
Data volume, Gbases250
Data volume, Tbytes0.14

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