Pelagibacterales bacterium (ID 473343) - BioProject

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Accession: PRJNA473343 ID: 473343

Pelagibacterales bacterium

Single-cell genomics of the SAR11 clade

Single-cell genomics of the SAR11 clade, collected from the Mediterranean Sea (Blanes Bay Microbial Observatory, BBMO).

Accession	PRJNA473343
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Haro-Moreno JM et al., "Ecogenomics of the SAR11 clade.", Environ Microbiol, 2020 May;22(5):1748-1763 Martinez-Hernandez F et al., "Single-cell genomics uncover Pelagibacter as the putative host of the extremely abundant uncultured 37-F6 viral population in the ocean.", ISME J, 2019 Jan;13(1):232-236
Submission	Registration date: 28-May-2018 Evolutionary Genomics Group
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	46
SRA Experiments	1
Publications
PubMed	2
PMC	2
Other datasets
BioSample	47
Assembly	46

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

46
46

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_014654455.1	JACWCY000000000	SAMN15685163	SAG-MED01	Pelagibacterales bacterium SAG-MED01
GCA_014654485.1	JACWCZ000000000	SAMN15685164	SAG-MED02	Pelagibacterales bacterium SAG-MED02
GCA_014654465.1	JACWDA000000000	SAMN15685165	SAG-MED03	Pelagibacterales bacterium SAG-MED03
GCA_014654375.1	JACWDB000000000	SAMN15685166	SAG-MED04	Pelagibacterales bacterium SAG-MED04
GCA_014654415.1	JACWDC000000000	SAMN15685167	SAG-MED05	Pelagibacterales bacterium SAG-MED05
GCA_014654355.1	JACWDD000000000	SAMN15685168	SAG-MED06	Pelagibacterales bacterium SAG-MED06
GCA_014654315.1	JACWDE000000000	SAMN15685169	SAG-MED07	Pelagibacterales bacterium SAG-MED07
GCA_014654325.1	JACWDF000000000	SAMN15685170	SAG-MED08	Pelagibacterales bacterium SAG-MED08
GCA_014654245.1	JACWDG000000000	SAMN15685171	SAG-MED09	Pelagibacterales bacterium SAG-MED09
GCA_014654235.1	JACWDH000000000	SAMN15685172	SAG-MED10	Pelagibacterales bacterium SAG-MED10
GCA_014654265.1	JACWDI000000000	SAMN15685173	SAG-MED11	Pelagibacterales bacterium SAG-MED11
GCA_014654185.1	JACWDJ000000000	SAMN15685174	SAG-MED12	Pelagibacterales bacterium SAG-MED12
GCA_014654165.1	JACWDK000000000	SAMN15685175	SAG-MED13	Pelagibacterales bacterium SAG-MED13
GCA_014654145.1	JACWDL000000000	SAMN15685176	SAG-MED14	Pelagibacterales bacterium SAG-MED14
GCA_014654065.1	JACWDM000000000	SAMN15685177	SAG-MED15	Pelagibacterales bacterium SAG-MED15
GCA_014654125.1	JACWDN000000000	SAMN15685178	SAG-MED16	Pelagibacterales bacterium SAG-MED16
GCA_014654115.1	JACWDO000000000	SAMN15685179	SAG-MED17	Pelagibacterales bacterium SAG-MED17
GCA_014654055.1	JACWDP000000000	SAMN15685180	SAG-MED18	Pelagibacterales bacterium SAG-MED18
GCA_014654035.1	JACWDQ000000000	SAMN15685181	SAG-MED19	Pelagibacterales bacterium SAG-MED19
GCA_014653975.1	JACWDR000000000	SAMN15685182	SAG-MED20	Pelagibacterales bacterium SAG-MED20
GCA_014653955.1	JACWDS000000000	SAMN15685183	SAG-MED21	Pelagibacterales bacterium SAG-MED21
GCA_014653985.1	JACWDT000000000	SAMN15685184	SAG-MED22	Pelagibacterales bacterium SAG-MED22
GCA_014653935.1	JACWDU000000000	SAMN15685185	SAG-MED23	Pelagibacterales bacterium SAG-MED23
GCA_014653915.1	JACWDV000000000	SAMN15685186	SAG-MED24	Pelagibacterales bacterium SAG-MED24
GCA_014653865.1	JACWDW000000000	SAMN15685187	SAG-MED25	Pelagibacterales bacterium SAG-MED25
GCA_014653845.1	JACWDX000000000	SAMN15685188	SAG-MED27	Pelagibacterales bacterium SAG-MED27
GCA_014653835.1	JACWDY000000000	SAMN15685189	SAG-MED28	Pelagibacterales bacterium SAG-MED28
GCA_014653815.1	JACWDZ000000000	SAMN15685190	SAG-MED29	Pelagibacterales bacterium SAG-MED29
GCA_014653775.1	JACWEA000000000	SAMN15685191	SAG-MED30	Pelagibacterales bacterium SAG-MED30
GCA_014653715.1	JACWEB000000000	SAMN15685192	SAG-MED31	Pelagibacterales bacterium SAG-MED31
GCA_014653725.1	JACWEC000000000	SAMN15685193	SAG-MED32	Pelagibacterales bacterium SAG-MED32
GCA_014653735.1	JACWED000000000	SAMN15685194	SAG-MED33	Pelagibacterales bacterium SAG-MED33
GCA_014653665.1	JACWEE000000000	SAMN15685195	SAG-MED34	Pelagibacterales bacterium SAG-MED34
GCA_014653655.1	JACWEF000000000	SAMN15685196	SAG-MED35	Pelagibacterales bacterium SAG-MED35
GCA_014653605.1	JACWEG000000000	SAMN15685197	SAG-MED37	Pelagibacterales bacterium SAG-MED37
GCA_014653585.1	JACWEH000000000	SAMN15685198	SAG-MED38	Pelagibacterales bacterium SAG-MED38
GCA_014653625.1	JACWEI000000000	SAMN15685199	SAG-MED39	Pelagibacterales bacterium SAG-MED39
GCA_014653545.1	JACWEJ000000000	SAMN15685200	SAG-MED41	Pelagibacterales bacterium SAG-MED41
GCA_014653535.1	JACWEK000000000	SAMN15685201	SAG-MED43	Pelagibacterales bacterium SAG-MED43
GCA_014653495.1	JACWEL000000000	SAMN15685202	SAG-MED44	Pelagibacterales bacterium SAG-MED44
GCA_014653465.1	JACWEM000000000	SAMN15685203	SAG-MED45	Pelagibacterales bacterium SAG-MED45
GCA_014653455.1	JACWEN000000000	SAMN15685204	SAG-MED46	Pelagibacterales bacterium SAG-MED46
GCA_014653355.1	JACWEO000000000	SAMN15685205	SAG-MED47	Pelagibacterales bacterium SAG-MED47
GCA_014653375.1	JACWEP000000000	SAMN15685206	SAG-MED48	Pelagibacterales bacterium SAG-MED48
GCA_014653365.1	JACWEQ000000000	SAMN15685207	SAG-MED49	Pelagibacterales bacterium SAG-MED49
GCA_014653385.1	JACWER000000000	SAMN15685208	SAG-MED50	Pelagibacterales bacterium SAG-MED50

SRA Data Details

Parameter	Value
Data volume, Gbases	2
Data volume, Mbytes	681

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Pelagibacterales bacterium

Single-cell genomics of the SAR11 clade

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