U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from BioSample

Accession: PRJNA473343 ID: 473343

Pelagibacterales bacterium

Single-cell genomics of the SAR11 clade

Single-cell genomics of the SAR11 clade, collected from the Mediterranean Sea (Blanes Bay Microbial Observatory, BBMO).
AccessionPRJNA473343
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications
  • Haro-Moreno JM et al., "Ecogenomics of the SAR11 clade.", Environ Microbiol, 2020 May;22(5):1748-1763
  • Martinez-Hernandez F et al., "Single-cell genomics uncover Pelagibacter as the putative host of the extremely abundant uncultured 37-F6 viral population in the ocean.", ISME J, 2019 Jan;13(1):232-236
SubmissionRegistration date: 28-May-2018
Evolutionary Genomics Group
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)46
SRA Experiments1
Publications
PubMed2
PMC2
Other datasets
BioSample47
Assembly46
Assembly details:
Assembly levelNumber of Assemblies
46
46
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_014654455.1ContigJACWCY000000000SAMN15685163
SAG-MED01
GCA_014654485.1ContigJACWCZ000000000SAMN15685164
SAG-MED02
GCA_014654465.1ContigJACWDA000000000SAMN15685165
SAG-MED03
GCA_014654375.1ContigJACWDB000000000SAMN15685166
SAG-MED04
GCA_014654415.1ContigJACWDC000000000SAMN15685167
SAG-MED05
GCA_014654355.1ContigJACWDD000000000SAMN15685168
SAG-MED06
GCA_014654315.1ContigJACWDE000000000SAMN15685169
SAG-MED07
GCA_014654325.1ContigJACWDF000000000SAMN15685170
SAG-MED08
GCA_014654245.1ContigJACWDG000000000SAMN15685171
SAG-MED09
GCA_014654235.1ContigJACWDH000000000SAMN15685172
SAG-MED10
GCA_014654265.1ContigJACWDI000000000SAMN15685173
SAG-MED11
GCA_014654185.1ContigJACWDJ000000000SAMN15685174
SAG-MED12
GCA_014654165.1ContigJACWDK000000000SAMN15685175
SAG-MED13
GCA_014654145.1ContigJACWDL000000000SAMN15685176
SAG-MED14
GCA_014654065.1ContigJACWDM000000000SAMN15685177
SAG-MED15
GCA_014654125.1ContigJACWDN000000000SAMN15685178
SAG-MED16
GCA_014654115.1ContigJACWDO000000000SAMN15685179
SAG-MED17
GCA_014654055.1ContigJACWDP000000000SAMN15685180
SAG-MED18
GCA_014654035.1ContigJACWDQ000000000SAMN15685181
SAG-MED19
GCA_014653975.1ContigJACWDR000000000SAMN15685182
SAG-MED20
GCA_014653955.1ContigJACWDS000000000SAMN15685183
SAG-MED21
GCA_014653985.1ContigJACWDT000000000SAMN15685184
SAG-MED22
GCA_014653935.1ContigJACWDU000000000SAMN15685185
SAG-MED23
GCA_014653915.1ContigJACWDV000000000SAMN15685186
SAG-MED24
GCA_014653865.1ContigJACWDW000000000SAMN15685187
SAG-MED25
GCA_014653845.1ContigJACWDX000000000SAMN15685188
SAG-MED27
GCA_014653835.1ContigJACWDY000000000SAMN15685189
SAG-MED28
GCA_014653815.1ContigJACWDZ000000000SAMN15685190
SAG-MED29
GCA_014653775.1ContigJACWEA000000000SAMN15685191
SAG-MED30
GCA_014653715.1ContigJACWEB000000000SAMN15685192
SAG-MED31
GCA_014653725.1ContigJACWEC000000000SAMN15685193
SAG-MED32
GCA_014653735.1ContigJACWED000000000SAMN15685194
SAG-MED33
GCA_014653665.1ContigJACWEE000000000SAMN15685195
SAG-MED34
GCA_014653655.1ContigJACWEF000000000SAMN15685196
SAG-MED35
GCA_014653605.1ContigJACWEG000000000SAMN15685197
SAG-MED37
GCA_014653585.1ContigJACWEH000000000SAMN15685198
SAG-MED38
GCA_014653625.1ContigJACWEI000000000SAMN15685199
SAG-MED39
GCA_014653545.1ContigJACWEJ000000000SAMN15685200
SAG-MED41
GCA_014653535.1ContigJACWEK000000000SAMN15685201
SAG-MED43
GCA_014653495.1ContigJACWEL000000000SAMN15685202
SAG-MED44
GCA_014653465.1ContigJACWEM000000000SAMN15685203
SAG-MED45
GCA_014653455.1ContigJACWEN000000000SAMN15685204
SAG-MED46
GCA_014653355.1ContigJACWEO000000000SAMN15685205
SAG-MED47
GCA_014653375.1ContigJACWEP000000000SAMN15685206
SAG-MED48
GCA_014653365.1ContigJACWEQ000000000SAMN15685207
SAG-MED49
GCA_014653385.1ContigJACWER000000000SAMN15685208
SAG-MED50
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes681

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center