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Genome Information for Bubalus bubalis
Compared with granulosa cells from healthy follicles, 2888 (1790 up-regulated, 1098 down-regulated) and 1629 (1230 up-regulated, 399 down-regulated) DEGs (|FC| > 1.75 and P value < 0.05) were identified in granulosa cells of early atretic follicles and late atretic follicle, respectively. Out of these DEGs, 1217 genes were commonly shared among the two comparisons
Overall design: GCs were collected from healthy follicles, early atretic follicles and late atretic follicle for transcriptome analysis using second-generation high-throughput sequencing
| Accession | PRJNA713391; GEO: GSE168679 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Bubalus bubalis[Taxonomy ID: 89462] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus; Bubalus bubalis |
| Publications | Cheng J et al., "Integration of transcriptomics and non-targeted metabolomics reveals the underlying mechanism of follicular atresia in Chinese buffalo.", J Steroid Biochem Mol Biol, 2021 Sep;212:105944 |
| Submission | Registration date: 10-Mar-2021
Animal reproductive cloning, College of Animal Science and Technology, Guangxi University |
| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 9 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 9 |
| GEO DataSets | 1 |