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Accession: PRJNA734360 ID: 734360

Whole-genome transcriptome analysis of tomato and Arabidopsis roots in the shade

RNA-seq analysis of arabidopsis and tomato roots in shaded and unshaded seedlings. Overall design: Time-course RNA-seq analysis in Arabidopsis and tomato roots unshaded or exposed to shade
AccessionPRJNA734360; GEO: GSE175963
Data TypeTranscriptome or Gene expression
ScopeMultispecies
PublicationsRosado D et al., "WRKY transcription factors and ethylene signaling modify root growth during the shade-avoidance response.", Plant Physiol, 2022 Feb 4;188(2):1294-1311
SubmissionRegistration date: 1-Jun-2021
Pedmale Lab, Pedmale, Cold Spring Harbor Laboratory
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments40
Publications
PubMed1
PMC1
Other datasets
BioSample40
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5
SRA Data Details
ParameterValue
Data volume, Gbases68
Data volume, Mbytes15001

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