Alviniconcha and Ifremeria nautilei snails and the... (ID 523619) - BioProject

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Accession: PRJNA523619 ID: 523619

Alviniconcha and Ifremeria nautilei snails and their bacterial symbionts

Alviniconcha and Ifremeria metagenomics

Sequencing and assembly of gill tissue DNA from the hydrothermal vent snails Alviniconcha and Ifremeria

Accession	PRJNA523619
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	mollusc metagenome[Taxonomy ID: 1417798] unclassified sequences; metagenomes; organismal metagenomes; mollusc metagenome
Publications	Breusing C et al., "Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses.", Proc Natl Acad Sci U S A, 2022 Apr 5;119(14):e2115608119 Beinart RA et al., "The Bacterial Symbionts of Closely Related Hydrothermal Vent Snails With Distinct Geochemical Habitats Show Broad Similarity in Chemoautotrophic Gene Content.", Front Microbiol, 2019;10:1818
Submission	Registration date: 1-Feb-2022 University of Rhode Island

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	119
SRA Experiments	196
Publications
PubMed	2
PMC	2
Other datasets
BioSample	247
Assembly	119

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

118
1
119

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_024511765.1	JANEKT000000000	SAMN29718513	K09_219-Gamma1	Gammaproteobacteria bacterium
GCA_024511745.1	JANEKU000000000	SAMN29718514	K09_222-Gamma1	Gammaproteobacteria bacterium
GCA_024511725.1	JANEKW000000000	SAMN29718516	K09_234-Gamma1	Gammaproteobacteria bacterium
GCA_024511695.1	JANEKV000000000	SAMN29718515	K09_223-Gamma1	Gammaproteobacteria bacterium
GCA_024511685.1	JANEKX000000000	SAMN29718517	K09_243-Gamma1	Gammaproteobacteria bacterium
GCA_024511655.1	JANEKY000000000	SAMN29718518	K16_41-Gamma1	Gammaproteobacteria bacterium
GCA_024511645.1	JANEKZ000000000	SAMN29718519	K16_49-Gamma1	Gammaproteobacteria bacterium
GCA_024511595.1	JANELC000000000	SAMN29718522	K16_63-Gamma1	Gammaproteobacteria bacterium
GCA_024511615.1	JANELB000000000	SAMN29718521	K16_55-Gamma1	Gammaproteobacteria bacterium
GCA_024511585.1	JANELA000000000	SAMN29718520	K16_53-Gamma1	Gammaproteobacteria bacterium
GCA_024511565.1	JANELD000000000	SAMN29718523	K16_65-Gamma1	Gammaproteobacteria bacterium
GCA_024511545.1	JANELE000000000	SAMN29718524	K16_67-Gamma1	Gammaproteobacteria bacterium
GCA_024511505.1	JANELF000000000	SAMN29718525	S16_108-Gamma1	Gammaproteobacteria bacterium
GCA_024511485.1	JANELG000000000	SAMN29718526	S16_204-Gamma1	Gammaproteobacteria bacterium
GCA_024511465.1	JANELH000000000	SAMN29718527	S09_157-Gamma1	Gammaproteobacteria bacterium
GCA_024511445.1	JANELI000000000	SAMN29718528	S09_220-Gamma1	Gammaproteobacteria bacterium
GCA_024511425.1	JANELL000000000	SAMN29718531	S09_231-Gamma1	Gammaproteobacteria bacterium
GCA_024511385.1	JANELK000000000	SAMN29718530	S09_228-Gamma1	Gammaproteobacteria bacterium
GCA_024511395.1	JANELJ000000000	SAMN29718529	S09_221-Gamma1	Gammaproteobacteria bacterium
GCA_024511365.1	JANELM000000000	SAMN29718532	S09_232-Gamma1	Gammaproteobacteria bacterium
GCA_024511345.1	JANELN000000000	SAMN29718533	S09_235-Gamma1	Gammaproteobacteria bacterium
GCA_024511325.1	JANELP000000000	SAMN29718535	S09_238-Gamma1	Gammaproteobacteria bacterium
GCA_024511305.1	JANELO000000000	SAMN29718534	S09_237-Gamma1	Gammaproteobacteria bacterium
GCA_024511285.1	JANELQ000000000	SAMN29718536	S09_239-Gamma1	Gammaproteobacteria bacterium
GCA_024511265.1	JANELR000000000	SAMN29718537	S16_209-Gamma1	Gammaproteobacteria bacterium
GCA_024511235.1	JANELS000000000	SAMN29718538	S16_210-Gamma1	Gammaproteobacteria bacterium
GCA_024511225.1	JANELT000000000	SAMN29718539	S16_367-Gamma1	Gammaproteobacteria bacterium
GCA_024511185.1	JANELU000000000	SAMN29718540	S16_371-Gamma1	Gammaproteobacteria bacterium
GCA_024511165.1	JANELW000000000	SAMN29718542	S16_485-Gamma1	Gammaproteobacteria bacterium
GCA_024511145.1	JANELV000000000	SAMN29718541	S16_471-Gamma1	Gammaproteobacteria bacterium
GCA_024511125.1	JANELY000000000	SAMN29718544	S16_491-Gamma1	Gammaproteobacteria bacterium
GCA_024511085.1	JANELX000000000	SAMN29718543	S16_487-Gamma1	Gammaproteobacteria bacterium
GCA_024511055.1	JANELZ000000000	SAMN29718545	S16_685-Gamma1	Gammaproteobacteria bacterium
GCA_024511045.1	JANEMG000000000	SAMN29718558	I09_184-Ifr-MOX	Gammaproteobacteria bacterium
GCA_024511005.1	JANEMF000000000	SAMN29718559	I09_191-Ifr-MOX	Gammaproteobacteria bacterium
GCA_024510985.1	JANEME000000000	SAMN29718560	I09_193-Ifr-MOX	Gammaproteobacteria bacterium
GCA_024510965.1	JANEMD000000000	SAMN29718561	S09_149-GammaLau	Gammaproteobacteria bacterium
GCA_024510945.1	JANEMC000000000	SAMN29718562	S09_157-GammaLau	Gammaproteobacteria bacterium
GCA_024510845.1	JANEMA000000000	SAMN29718564	S09_197-GammaLau	Gammaproteobacteria bacterium
GCA_024510805.1	JANEMB000000000	SAMN29718563	S09_181-GammaLau	Gammaproteobacteria bacterium
GCA_024511825.1	JANEKS000000000	SAMN29718512	K09_115-Gamma1	Gammaproteobacteria bacterium
GCA_024511805.1	JANEKR000000000	SAMN29718511	K09_101-Gamma1	Gammaproteobacteria bacterium
GCA_021766865.1	JAICBO000000000	SAMN20230781	Gamma1	Gammaproteobacteria endosymbiont of Alviniconcha kojimai
GCA_021766825.1	JAICBQ000000000	SAMN20230783	GammaLau	Gammaproteobacteria endosymbiont of Alviniconcha strummeri
GCA_021766795.1	JAICBN000000000	SAMN20230780	Ifr-MOX	Gammaproteobacteria endosymbiont of Ifremeria nautilei
GCA_024513615.1	JANEHY000000000	SAMN29718440	B09_303-Epsilon	Sulfurimonas sp.
GCA_024513605.1	JANEHX000000000	SAMN29718439	B09_301-Epsilon	Sulfurimonas sp.
GCA_024513585.1	JANEHZ000000000	SAMN29718441	B09_304-Epsilon	Sulfurimonas sp.
GCA_024513565.1	JANEIB000000000	SAMN29718443	B09_310-Epsilon	Sulfurimonas sp.
GCA_024513545.1	JANEIA000000000	SAMN29718442	B09_307-Epsilon	Sulfurimonas sp.
GCA_024513505.1	JANEIG000000000	SAMN29718448	B16_808-Sulf	Sulfurimonas sp.
GCA_024513515.1	JANEIC000000000	SAMN29718444	B09_337-Epsilon	Sulfurimonas sp.
GCA_024513485.1	JANEID000000000	SAMN29718445	B09_339-Epsilon	Sulfurimonas sp.
GCA_024513455.1	JANEIE000000000	SAMN29718446	B16_3-Epsilon	Sulfurimonas sp.
GCA_024513445.1	JANEIF000000000	SAMN29718447	B16_801-Sulf	Sulfurimonas sp.
GCA_024513425.1	JANEIH000000000	SAMN29718449	B16_812-Sulf	Sulfurimonas sp.
GCA_024513395.1	JANEIK000000000	SAMN29718452	B16_897-Sulf	Sulfurimonas sp.
GCA_024513385.1	JANEII000000000	SAMN29718450	B16_816-Sulf	Sulfurimonas sp.
GCA_024513355.1	JANEIJ000000000	SAMN29718451	B16_826-Sulf	Sulfurimonas sp.
GCA_021766785.1	JAICBP000000000	SAMN20230782	Epsilon	Sulfurimonas sp. endosymbiont of Alviniconcha boucheti
GCA_024513345.1	JANEIM000000000	SAMN29718454	I09_185-Ifr-SOX	Thiolapillus sp.
GCA_024511785.1	JANEKQ000000000	SAMN29718510	I16_1010-Ifr-SOX	Thiolapillus sp.
GCA_024513325.1	JANEIL000000000	SAMN29718453	I09_184-Ifr-SOX	Thiolapillus sp.
GCA_024513305.1	JANEIN000000000	SAMN29718455	I09_187-Ifr-SOX	Thiolapillus sp.
GCA_024513285.1	JANEIO000000000	SAMN29718456	I09_188-Ifr-SOX	Thiolapillus sp.
GCA_024513245.1	JANEIR000000000	SAMN29718459	I09_191-Ifr-SOX	Thiolapillus sp.
GCA_024513255.1	JANEIP000000000	SAMN29718457	I09_189-Ifr-SOX	Thiolapillus sp.
GCA_024513225.1	JANEIQ000000000	SAMN29718458	I09_190-Ifr-SOX	Thiolapillus sp.
GCA_024513185.1	JANEIS000000000	SAMN29718460	I09_192-Ifr-SOX	Thiolapillus sp.
GCA_024513065.1	JANEIT000000000	SAMN29718461	I09_193-Ifr-SOX	Thiolapillus sp.
GCA_024513085.1	JANEIU000000000	SAMN29718462	I09_194-Ifr-SOX	Thiolapillus sp.
GCA_024513075.1	JANEIV000000000	SAMN29718463	I09_233-Ifr-SOX	Thiolapillus sp.
GCA_024513045.1	JANEIW000000000	SAMN29718464	I09_234-Ifr-SOX	Thiolapillus sp.
GCA_024513005.1	JANEIX000000000	SAMN29718465	I09_235-Ifr-SOX	Thiolapillus sp.
GCA_024512895.1	JANEJA000000000	SAMN29718468	I09_238-Ifr-SOX	Thiolapillus sp.
GCA_024512905.1	JANEIY000000000	SAMN29718466	I09_236-Ifr-SOX	Thiolapillus sp.
GCA_024512865.1	JANEIZ000000000	SAMN29718467	I09_237-Ifr-SOX	Thiolapillus sp.
GCA_024512845.1	JANEJB000000000	SAMN29718469	I09_239-Ifr-SOX	Thiolapillus sp.
GCA_024512805.1	JANEJD000000000	SAMN29718471	I09_241-Ifr-SOX	Thiolapillus sp.
GCA_024512745.1	JANEJC000000000	SAMN29718470	I09_240-Ifr-SOX	Thiolapillus sp.
GCA_024512695.1	JANEJE000000000	SAMN29718472	I09_242-Ifr-SOX	Thiolapillus sp.
GCA_024512685.1	JANEJF000000000	SAMN29718473	I09_61-Ifr-SOX	Thiolapillus sp.
GCA_024512645.1	JANEJG000000000	SAMN29718474	I09_62-Ifr-SOX	Thiolapillus sp.
GCA_024512625.1	JANEJI000000000	SAMN29718476	I09_64-Ifr-SOX	Thiolapillus sp.
GCA_024512605.1	JANEJH000000000	SAMN29718475	I09_63-Ifr-SOX	Thiolapillus sp.
GCA_024512585.1	JANEJJ000000000	SAMN29718477	I09_65-Ifr-SOX	Thiolapillus sp.
GCA_024512545.1	JANEJK000000000	SAMN29718478	I09_66-Ifr-SOX	Thiolapillus sp.
GCA_024512465.1	JANEJO000000000	SAMN29718482	I09_70-Ifr-SOX	Thiolapillus sp.
GCA_024512445.1	JANEJM000000000	SAMN29718480	I09_68-Ifr-SOX	Thiolapillus sp.
GCA_024512405.1	JANEJN000000000	SAMN29718481	I09_69-Ifr-SOX	Thiolapillus sp.
GCA_024512385.1	JANEJL000000000	SAMN29718479	I09_67-Ifr-SOX	Thiolapillus sp.
GCA_024512365.1	JANEJP000000000	SAMN29718483	I16_1000-Ifr-SOX	Thiolapillus sp.
GCA_024512315.1	JANEJR000000000	SAMN29718485	I16_1004-Ifr-SOX	Thiolapillus sp.
GCA_024512285.1	JANEJS000000000	SAMN29718486	I16_1006-Ifr-SOX	Thiolapillus sp.
GCA_024512305.1	JANEJQ000000000	SAMN29718484	I16_1002-Ifr-SOX	Thiolapillus sp.
GCA_024512295.1	JANEJT000000000	SAMN29718487	I16_1008-Ifr-SOX	Thiolapillus sp.
GCA_024512265.1	JANEJU000000000	SAMN29718488	I16_1012-Ifr-SOX	Thiolapillus sp.
GCA_024512245.1	JANEJV000000000	SAMN29718489	I16_1014-Ifr-SOX	Thiolapillus sp.
GCA_024512225.1	JANEJX000000000	SAMN29718491	I16_1018-Ifr-SOX	Thiolapillus sp.
GCA_024512195.1	JANEJZ000000000	SAMN29718493	I16_122-Ifr-SOX	Thiolapillus sp.
GCA_024512185.1	JANEJY000000000	SAMN29718492	I16_121-Ifr-SOX	Thiolapillus sp.
GCA_024512165.1	JANEJW000000000	SAMN29718490	I16_1016-Ifr-SOX	Thiolapillus sp.
GCA_024512145.1	JANEKA000000000	SAMN29718494	I16_123-Ifr-SOX	Thiolapillus sp.
GCA_024512125.1	JANEKD000000000	SAMN29718497	I16_127-Ifr-SOX	Thiolapillus sp.
GCA_024512105.1	JANEKB000000000	SAMN29718495	I16_124-Ifr-SOX	Thiolapillus sp.
GCA_024512085.1	JANEKC000000000	SAMN29718496	I16_126-Ifr-SOX	Thiolapillus sp.
GCA_024512065.1	JANEKF000000000	SAMN29718499	I16_129-Ifr-SOX	Thiolapillus sp.
GCA_024512045.1	JANEKE000000000	SAMN29718498	I16_128-Ifr-SOX	Thiolapillus sp.
GCA_024511985.1	JANEKI000000000	SAMN29718502	I16_592-Ifr-SOX	Thiolapillus sp.
GCA_024512025.1	JANEKG000000000	SAMN29718500	I16_588-Ifr-SOX	Thiolapillus sp.
GCA_024511995.1	JANEKH000000000	SAMN29718501	I16_590-Ifr-SOX	Thiolapillus sp.
GCA_024511965.1	JANEKJ000000000	SAMN29718503	I16_594-Ifr-SOX	Thiolapillus sp.
GCA_024511945.1	JANEKL000000000	SAMN29718505	I16_598-Ifr-SOX	Thiolapillus sp.
GCA_024511925.1	JANEKK000000000	SAMN29718504	I16_596-Ifr-SOX	Thiolapillus sp.
GCA_024511905.1	JANEKM000000000	SAMN29718506	I16_600-Ifr-SOX	Thiolapillus sp.
GCA_024511885.1	JANEKN000000000	SAMN29718507	I16_602-Ifr-SOX	Thiolapillus sp.
GCA_024511865.1	JANEKO000000000	SAMN29718508	I16_604-Ifr-SOX	Thiolapillus sp.
GCA_024511845.1	JANEKP000000000	SAMN29718509	I16_718-Ifr-SOX	Thiolapillus sp.
GCA_021766955.1	JAICBM000000000	SAMN20230779	Ifr-SOX	Thiolapillus sp. endosymbiont of Ifremeria nautilei

SRA Data Details

Parameter	Value
Data volume, Gbases	828
Data volume, Tbytes	0.31

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Alviniconcha and Ifremeria nautilei snails and their bacterial symbionts

Alviniconcha and Ifremeria metagenomics

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